Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01789 ATGAAACCCATTACTTGTCTTTCCATCTTCTATGTTTCAATATATTGTAGCTGCTTTGCCATGGGACCAAGCTCCAGCGAATCGGTTAAGTTAGTTAATGTCGGTGTGATTCTCGACACAGCTGACGCATGGATTGGTAAGTTGTGTTTGAGTTGCATCCAAATGGCACACTCGGATTTCTATGCTATCCACAGTTACTATAACACTAGACTTGTTCTCCATGTCAAAGATTCTAAAAGTGAGCTGATTGCCGCTGCTTCAGCAGCTTtagatttgataaaaaatgaagcaGTGCAAGCCATTATAGGGCCACAAGATTCAATGCAAACCAACCTGATTATAGATGTCTGTAACAAAGCAAGGGTGCCAATCCTTTCATTCTCAGCAACAAGTCCTTCCCTGGCTTCCCCTCAGAATCCTTATTTTTACCGAATTGCCCCGAATGAGTGTGCTCAAGCACAAGCCATTTCAGCACTTTTCCAAGCTTTCCAATGGAGAGAAGTGGTGCCCATATACATACAAGGCATGTTCTCTGAGGAAGTAATATCCTGCATAACTCGAGCCTTGCAAGAAGCTAATATCCATGTTTCTTATCTAGCTGCAATTCACCACTCACCAGATGATAACCAAATTGTCCAAGAGCTTCACAAATTAACAACTTTGACAACAAGAGTCTTCATTGTGCACATGTCTCCCATGTTTGGTTCCCGTCTCTTTGCCATGGCAAAAGAGATTGGAATGATGAGTGAAGGCTATGTTTGGATCCTCACCAGTGAAATGACTAACCAGTTGACCTCCTTAAATTCTTCAATCACTGATACGATGCAGGGTGTTCTAGGTTTAGGTGCATATTTTCCTAAAACAAAGGAGTTTCAACATTTTCAGGTAGGTtggaaatcaaaatttcaacaagaaaatCCCACCATTATAGGACCTGAATTGAATGTTTACTGCCTTTGGGCTTATGATGCTGTAACAGCACTTGCCATGGCAGTTGAGAAGGCTGGGGTCAAAGAATTTGGCTTTCAAAATACTGGTATATATCCCAGCAATACAACAGATTTTGAAACTGATCTTGGAGTTTCTTTGATTGGTCCAAAACTCAGAAAATCTCTATCAGAAACCAGATTTCGAGGACTTTCAGGTGATTTCAATCTGGTTGACGGAGAAGTCAACTCATCAATTTTCCAGATAATTAATGTGTTTGGTGATGGAAAAAAGGTAGTAGGATTTTGGACACCAGAAAATGGACTGACAAGAAAAGTCAATTCAACAAAGACAAACACAGACACAGGCATATACTCAACTTCCAAGACCAATTTAGGACCAATTATATGGCCAGGAGACTCTTCCTTTGCACCTGAAGGCTGGGATTTACTAgcaaacagaaagaaattgaGGATTGGAATTCCGGTCAAGCCCGGATATGGATTGGATGAATTGGTTAGTGCGCATTATGATCCAGTTACCAACAGAATAAATGTGAGTGGCTACTGTATAGATGTTTTTAAGGTTGTAATGGACGCATTACCATATCATGTTCCATATGAATTCATTCCTTTTAACCCTAGAGATTATGAGAACTTTAGCACAGGTTCCTTCTACGATGATTTGATGCGGGAAGTCTATCTTGGAAAATTTGATGCTGCGGTGGGAGATATAACGATTCGAGCTCAGAGATCGCTGTATGTGGACTTCACGATACCTTTCACAGAAAATGAAGCAACTTTTATAGTGCCAATCGaacagaagagaaagaaagacgCTTGGGTCTTCTTGAAACCTTTGACATGGGAATTATGGGTCACAAGTGTTTGCTTCTTTGTGTTCATTGGTTTCGTGGTTTGGCTGCTGGAACGCGGAGTCAATAAAGAAGAATTTAGGGGTTGCCCCTCAGATCAAGTGGGTACAAGCCTTTGGTCTTCCTTCTCAACCTTGGTATTTTCACAATCAAGGTTTGTGGTGATCGTATGGGTTTTTGTGGGGCTGATATTGACCCAGAGTTATACAGCAAGCTTGACAACACTTTTGACAGTGGAACAGCTCCGACCCACCGTGACAGATGTAAATCAGCTCATACAGAGTGGAGACTATATTGGACACCAACATGGTTCCTCTATTATTGAATTCTTAAGAAAAATGGGTTTTGATGATACCAAGCTTCGTGTTGTTAGGTCTATTGAAGAAAGTGATCACCTTCTAACATTAGGAAGCAGAAATGGAGGTATTGCTGCATCCTTTGCCGAAACCccatatataaaagttatgcAGTCAAGGTATTGCTCCAAATATACAACCATTGGACCAAGTTACCAGAGTCAAGGATTTGGCTTTGCTTTTAGAAGAAACTCCCCATTTGTAACTGATGTTTCAAGGGCAATCTTAAACTTGACAGAGAAAAATCAAGATATTATGAAAGCAATTGTAAACAAATGGTTCAACAATAAATCACGTTGTTTGCAACCCTCCATTGTGGATGCTTCCTATATTCTGGATCTTGACAGTTTCCATGGACTATTCCTCTTATCTGGGATTGCCTCATCGTTAGCGCTTATCATATACGCAGCTGCTTTCTTATACAAACATTGGCAGGAATTAAAGCAGTTTCATGCAAACGATTCACTGTGGAAAAGAATTTGTATCTTGTTAATCATCTTAAGACAAAATGACATTAGGATCCATGCTGGTGAACAGGTATCCAGAACTACTTCTACGATTAGCGGTGATGTTCATGATATAAATGTGATTGATGCCTCTTG 2759 0.3911 MKPITCLSIFYVSIYCSCFAMGPSSSESVKLVNVGVILDTADAWIGKLCLSCIQMAHSDFYAIHSYYNTRLVLHVKDSKSELIAAASAALDLIKNEAVQAIIGPQDSMQTNLIIDVCNKARVPILSFSATSPSLASPQNPYFYRIAPNECAQAQAISALFQAFQWREVVPIYIQGMFSEEVISCITRALQEANIHVSYLAAIHHSPDDNQIVQELHKLTTLTTRVFIVHMSPMFGSRLFAMAKEIGMMSEGYVWILTSEMTNQLTSLNSSITDTMQGVLGLGAYFPKTKEFQHFQVGWKSKFQQENPTIIGPELNVYCLWAYDAVTALAMAVEKAGVKEFGFQNTGIYPSNTTDFETDLGVSLIGPKLRKSLSETRFRGLSGDFNLVDGEVNSSIFQIINVFGDGKKVVGFWTPENGLTRKVNSTKTNTDTGIYSTSKTNLGPIIWPGDSSFAPEGWDLLANRKKLRIGIPVKPGYGLDELVSAHYDPVTNRINVSGYCIDVFKVVMDALPYHVPYEFIPFNPRDYENFSTGSFYDDLMREVYLGKFDAAVGDITIRAQRSLYVDFTIPFTENEATFIVPIEQKRKKDAWVFLKPLTWELWVTSVCFFVFIGFVVWLLERGVNKEEFRGCPSDQVGTSLWSSFSTLVFSQSRFVVIVWVFVGLILTQSYTASLTTLLTVEQLRPTVTDVNQLIQSGDYIGHQHGSSIIEFLRKMGFDDTKLRVVRSIEESDHLLTLGSRNGGIAASFAETPYIKVMQSRYCSKYTTIGPSYQSQGFGFAFRRNSPFVTDVSRAILNLTEKNQDIMKAIVNKWFNNKSRCLQPSIVDASYILDLDSFHGLFLLSGIASSLALIIYAAAFLYKHWQELKQFHANDSLWKRICILLIILRQNDIRIHAGEQVSRTTSTISGDVHDINVIDAS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01789 919 Gene3D - 148 415 - -
Bva09g01789 919 PIRSF IGluLR_plant 1 908 IPR017103 -
Bva09g01789 919 Gene3D - 589 723 - -
Bva09g01789 919 Gene3D - 460 588 - -
Bva09g01789 919 CDD PBP1_GABAb_receptor_plant 33 421 IPR044440 -
Bva09g01789 919 Pfam Ligand-gated ion channel 815 846 IPR001320 GO:0015276|GO:0016020
Bva09g01789 919 Gene3D - 38 394 - -
Bva09g01789 919 SUPERFAMILY Periplasmic binding protein-like I 33 448 IPR028082 -
Bva09g01789 919 Gene3D - 753 821 - -
Bva09g01789 919 Pfam Receptor family ligand binding region 49 401 IPR001828 -
Bva09g01789 919 SUPERFAMILY Periplasmic binding protein-like II 443 815 - -
Bva09g01789 919 SMART GluR_14 465 815 IPR001320 GO:0015276|GO:0016020
Bva09g01789 919 CDD GluR_Plant 464 813 - -
Bva09g01789 919 Pfam Bacterial extracellular solute-binding proteins, family 3 484 814 IPR001638 -
Bva09g01789 919 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 894 - -
Bva09g01789 919 PANTHER GLUTAMATE RECEPTOR 2.9 32 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01789 Bva-Chr9 12217901 12223172 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01789 5 894 Ion Channels AT2G29100 44.160 0.0 740