Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01778 ATGCTATCATTCTCAGCAACAAGTCCTTCTCTAACTTCCCCACTAAATCCTTATTTTCACCGAATAGCCCAGAATGAGTGTGCTCAAGCACATGCAAATTCAGCACTTGTCCAAGCTTTCGAATGGAAAGAAGTGGCGCCCATATACATACAAGATATATATTCTGAGGAAGTAATACCTTGCATAACAAGAGCCTTGCAAGAGACTAATATCTTTGTTTCCTATCAAGCTGCAATTCCCCAATCACCAGATGATAACCAAATTGTCCAAGAGCTTCACAAATTAACAACTTTGACAACGAGAGTATTCATTGTGCACATGTCTCCCATACTTGGTTCCCCTCTCTTCGCCATTGCGAAAGAGATTGGAATGATGAGTGAAGGCTATGTTTGGATCCTCAACTTTGAAATGACTAACCAATTAGCATCCTTAAACTCTTCAGTAACTGATACTATGCAGGGTGTTTTAGGTTTAGGTGCCTATTTTCCTAAAACAAAGGAGTTTCAAGATTTTCAGGTTAGATggaaactaaaatttcaacaagaaaatCCCTCCGTTATAGGACCTGAATTGATTGTCCACCGTCTATGGGCTAATGATGCTGTAACAGCACTCGCCATGGCTGTTGAGAAGGCCGGGATCGAAGAATATGGCTTTCACAAGAGAAGTAAAGATTCTAGTGATACAATAGATTTTGAAACTCTTGGGTTTTCTTTAAGTGGTCCCAAACTTGCAGAATCACTGTCTAGAATCAGATTTCAAGGTCTTTCAGGGGATTTCAGTTTGGTTGACCAAGAAGTCAACTCATCAATTTTTCAGTTGGTAAATGTGTTTGTCGATGGCAAAAAATGTAGTGGGATTTTGGACACCAGAAACTGGACTGGCAGGGAAACTCAGTTCAACAGAGAAGGACGCAAACACAGGCATATATTAACCTCCAGAACTAATTTAGGACCAATTATATGGCCAGGGTATTCTTCTACTGCTCCTGGAGGCTGGGATTTGCTAGCAAATGGAAAGAAACTGAGAATAGTAGTTCCGTCTAAAACCATATTCAGGGGATTCGTTAATGTGGATTATGATCCTAGTACGAACAGAATAGAAGTTAGTGGCTACGGTATAGATGTTTTTAAGGCTGTAATGGAGGCAATGCCGTATCATGCTCCTTATGAATTCATCTTGGTACCTCGAGATCATGGCAACTTCAGCTCTGGTTACTATGATCATTTGACAAAGGAAGTCAAACTTGGAGGGCAATTGCACGCCAGCTCAGCATTCTTGATAGGTTTTCTGTTAAGATTAACATGGCAATA 1313 0.3983 MLSFSATSPSLTSPLNPYFHRIAQNECAQAHANSALVQAFEWKEVAPIYIQDIYSEEVIPCITRALQETNIFVSYQAAIPQSPDDNQIVQELHKLTTLTTRVFIVHMSPILGSPLFAIAKEIGMMSEGYVWILNFEMTNQLASLNSSVTDTMQGVLGLGAYFPKTKEFQDFQVRWKLKFQQENPSVIGPELIVHRLWANDAVTALAMAVEKAGIEEYGFHKRSKDSSDTIDFETLGFSLSGPKLAESLSRIRFQGLSGDFSLVDQEVNSSIFQLVNVFVDGKKCSGILDTRNWTGRETQFNREGRKHRHILTSRTNLGPIIWPGYSSTAPGGWDLLANGKKLRIVVPSKTIFRGFVNVDYDPSTNRIEVSGYGIDVFKAVMEAMPYHAPYEFILVPRDHGNFSSGYYDHLTKEVKLGGQLHASSAFLIGFLLRLTWQ 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01778 437 Pfam Receptor family ligand binding region 1 264 IPR001828 -
Bva09g01778 437 Gene3D - 336 423 - -
Bva09g01778 437 PANTHER OS06G0188250 PROTEIN 2 420 - -
Bva09g01778 437 SUPERFAMILY Periplasmic binding protein-like I 1 284 IPR028082 -
Bva09g01778 437 Gene3D - 27 186 - -
Bva09g01778 437 SUPERFAMILY Periplasmic binding protein-like II 319 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01778 Bva-Chr9 12093626 12094939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01778 1 417 Ion Channels AT2G24720 40.767 1.76e-100 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01778 K05387 - zju:107408189 387.111