Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01776 ATGAAAAGCATTGCTTGTGTTTCCATCTTCTACGTTTCAATATGTCCTATCTGCTTAGCCATAAGACAAAGCAGGACAGAACCAGTTAAAACAGTTAATGTTGGTGTGATTCTTGATACAACTGACGAATGGATTGACAAGTTATGTTTGACTTGCATCCAAATGGAAAACTCGGACTTCTACGCTACCCACAGTTACTATAACACTAGGCTTGTTCTCGCTGTCAGAGATTCTAAAAGTGACTTGATTGCAGCTACATCAGCAGAGTTCAAACTTGCATGTGAAGTCAACCTGAAAGAATTAAATGATACAGCTGTaggtttgataaaaaatgCGGCAGTACAAGCCATTATAGGGCCACAAGACTCGAAGGAAGCCAACCTGATTATAGAACTGTGCAACAAAGCAAGGGTGCCAATGCTATCATTCTCAGCAGCAAGTCCTTCTCTAACTTCCCCACGGAATCCTTATTTTTACCGAATAGCCCAGAATGAGTGTGCTCAAGCACATGCCATTTCAGCACTTGTCCAAGCTTTCGAATGGAAAGAAGTGGTGCCCATTTACAAACAAGACATATATTCTGAGGAAGTAATATCTGGCATAACAAGAGCCTTGCAAGAGGCTAATATCTTTGTTTCCTATCAAGCTGCAATTCCCCAATCACCAGATGATAACCATATCGTCCAAGAGCTTCACAAATTAAACCTTGACAATTA 716 0.3994 MKSIACVSIFYVSICPICLAIRQSRTEPVKTVNVGVILDTTDEWIDKLCLTCIQMENSDFYATHSYYNTRLVLAVRDSKSDLIAATSAEFKLACEVNLKELNDTAVGLIKNAAVQAIIGPQDSKEANLIIELCNKARVPMLSFSAASPSLTSPRNPYFYRIAQNECAQAHAISALVQAFEWKEVVPIYKQDIYSEEVISGITRALQEANIFVSYQAAIPQSPDDNHIVQELHKLNLDN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01776 238 Pfam Receptor family ligand binding region 49 233 IPR001828 -
Bva09g01776 238 PANTHER OS06G0188250 PROTEIN 7 235 - -
Bva09g01776 238 SUPERFAMILY Periplasmic binding protein-like I 31 233 IPR028082 -
Bva09g01776 238 Gene3D - 68 163 - -
Bva09g01776 238 PANTHER OS06G0188250 PROTEIN 7 235 - -
Bva09g01776 238 Gene3D - 164 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01776 Bva-Chr9 12050190 12052682 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01776 32 234 Ion Channels AT2G24720 39.409 1.71e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01776 K05387 - tcc:18507124 187.963