Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01758 ATGAACAACATAACTATGGTAGCATATAGTTTATCAAACTATACAAATATGGCTGAGAGTTTCAACCGCTGCAGCTATTCTTTTGTACACAAATCAGATGGTGGTTTTGGCTATAAGCTTTCTGCCCATGATGTGAAGCATGGACTACCATTTGAAAGGGCTCCTATGGTGCTTGATTGGGCTATCGGGACAGAAAATGGGACGTGTAATGCTTGCAGAAGCAATAGCTATTGTAATGACACACAGACTGGATACAGATTAACTCATAATTGTATAAGCAAAGATAACTGTAGAAACACCAACGAATCTTTTGTATGTTTCTGTAAGAAAGGGTATTCCGGAAAAGGAACAAAGGAAGCAGAATGCCAGAAAGAAAGTCTAGTTACAAGAGTTGTCACAATTGCAAGTGCAGGATTGATTGTGCTGCTTATTGGCATGTCAGTGACATACATGGTATATCAGAAGAAGAAACTTGTCAAACTCAAAGAGAAATTCTTCAGGCAGAATGGGGGTTTCATTTTGCTGCAGCAACTCTTTATAAGAAAAGACTCTTCTCAGGGAAGAGCTCAAATTTTCATGGCTGAGGAGCTAAAGAAGGCTACCAAGAACTATAATGAGAGCTTAATCATAGGCAAAGGAGGCTATGGAACTGTTTTCAAGGGGTTTTTGGCAGATAACAGAATTGTTGCTGTAAAGAAGTCCAAAATAGTAgaccaaagccaaattgaGCAGTTCATTAACGAGGTGGTTATTCTCTCCCAAATAAATCATAGGAATGTGGTCAAACTCTTGGGTTGTTGCTTAAGGACAGAAGTTCCTTTATTAGTTTATGAATTTGTAAACAATGGCACCCTCTATGATTATATTCACAATGAATCgaaagaaaacaatgtttATTGGAAAACACATTTAAGGATATCAGCAGAAGCAGCGGGAGCATTAGCATACCTTCACTCAGCTGCCTCCATTCCCATTATACACAGAGATGTCAAAACTGCAAACATTCTCCTGAATGAGACATACACAGCTAAAGTGTCTGATTTTGGAGCCTCGAGATTAGTTCCTATTGACCGTGCAGAAATTACTACAATGGTACAAGGAACTATTGGATACTTGGACCCAGAGTATATGCAAACAAGTCATCTCACTGAGAAGAGTGATGTGTATAGCTTTGGAGTAGTACTTGTGGAGCTACTTACTGGGGAGAaagcattttcatttgttaggccagaagagaagagaagtcTTTCTATGCACTTTTTGTTGGCCTTTAAAGAGGGTTGCTTGTTTGAAGTTCTTGAAAATGGGATtgtaaatgaagaaaataaggagGAGGTGATGGAAGTTGCAGCACTGGCATCAAAGTGCTTAAGGTTAATAGGGGAGGAGAGGCCTAGCATGAAGGAAGTGGCAATGGAGTTGGAAGGAATAAGAAAGACGAACAAGCATCCATGGGATAGCAGTAACATTGAGCGTAATTTGGAGAATGAATATTTGCTTCATGAGAAATCTGGACTTTATAAACATGGTGAAAGCAGCAGCCTTCAAAATACTGGGTATGACAGCATCAGAGATCAAGTACTCATTCCCCTTGACGATGGAAGATG 1607 0.3746 MNNITMVAYSLSNYTNMAESFNRCSYSFVHKSDGGFGYKLSAHDVKHGLPFERAPMVLDWAIGTENGTCNACRSNSYCNDTQTGYRLTHNCISKDNCRNTNESFVCFCKKGYSGKGTKEAECQKESLVTRVVTIASAGLIVLLIGMSVTYMVYQKKKLVKLKEKFFRQNGGFILLQQLFIRKDSSQGRAQIFMAEELKKATKNYNESLIIGKGGYGTVFKGFLADNRIVAVKKSKIVDQSQIEQFINEVVILSQINHRNVVKLLGCCLRTEVPLLVYEFVNNGTLYDYIHNESKENNVYWKTHLRISAEAAGALAYLHSAASIPIIHRDVKTANILLNETYTAKVSDFGASRLVPIDRAEITTMVQGTIGYLDPEYMQTSHLTEKSDVYSFGVVLVELLTGEKAFSFVRPEEKRSLSMHFLLAFKEGCLFEVLENGIVNEENKEEVMEVAALASKCLRLIGEERPSMKEVAMELEGIRKTNKHPWDSSNIERNLENEYLLHEKSGLYKHGESSSLQNTGYDSIRDQVLIPLDDGR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01758 535 CDD STKc_IRAK 210 477 - -
Bva09g01758 535 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 90 504 IPR045274 GO:0007166
Bva09g01758 535 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 90 504 - -
Bva09g01758 535 Gene3D Laminin 87 123 - -
Bva09g01758 535 ProSiteProfiles Protein kinase domain profile. 204 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01758 535 SMART serkin_6 204 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01758 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Bva09g01758 535 SUPERFAMILY Protein kinase-like (PK-like) 188 474 IPR011009 -
Bva09g01758 535 SUPERFAMILY Growth factor receptor domain 63 118 IPR009030 -
Bva09g01758 535 Pfam Protein tyrosine and serine/threonine kinase 209 474 IPR001245 GO:0004672|GO:0006468
Bva09g01758 535 Gene3D Phosphorylase Kinase; domain 1 175 279 - -
Bva09g01758 535 ProSitePatterns Protein kinases ATP-binding region signature. 210 233 IPR017441 GO:0005524
Bva09g01758 535 Gene3D Transferase(Phosphotransferase) domain 1 280 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01758 Bva-Chr9 11614279 11616531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01758 12 535 Receptor kinase-like Gene Family AT1G21230 47.266 3.25e-158 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva09g01758 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01758 - - ccaj:109807269 649.818