Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva09g01738 | ATGGAAGCcaacaaattttcaatcacATCTCCATACCAAGTTCTTACAATTCTCATATTCACCATTCTATGCATTTCTAACATCAAGGCAGCATCATCATGCAATAACACCGTTCCTTCCAATTCCTCCACCACCATTCCTTCTAATTACACCACAACTCCTTTCTATTCCCCCGCccactttttcaattttactatCACTCCTTCCAATTCCTCCACCCCCATTCCTTCCAATTCCACAGCCATTCCCTCCAATTCCACCACCACTCCTTACAATTCCTCTACCACCATTCCCTCCAATTCCTCCAATAGTACCATCCCTTCCAATTCCACCACCTTTCCCTCCAATTCCTCTACTCCCATTCCTTCCAATTCCTCCATCATCATTCCCTCCAATTCCACCACAATCAATGAAAATACCACTATCCCTCAAAACCAAACCTTTATAACCTACCTAAAAGGCTCCTGCAATTCCACCACATACCCATCACTATGCTACAGTTCTTTACTTCCATATGCTTCAAAAATTGAAGGggataattttaaactctgCAACATCTCCCTTACCCTCGCGTTAAAAGCCGCCTACAGCGCATCTTCCACAATAACAAAGCTATCCTGCAACAATAATTTGACTGAAACAGAAGCATCAGTTGTTCAAGATTGCCTGGACAATGCCAAGGACTCCATCGAGCAGTTGCTGCAGTCTTTGCAAGCTATGGAGCACTTAGACGGCATCGACAAAGAGTTTCAATTGAGCAGCATCAAGACTTGGGTGAGTGCTGCCATAACTGATTACAGCACATGCTCAGATGGGTTTGATGAGCAGAATTTGGATGGCACTGTGAGGGACAAgataaggaagaaaattttgaatgctGAAAGGATGACTAGCAATGCTttgtatttcataaataatctCCCTTACTG | 929 | 0.3994 | MEANKFSITSPYQVLTILIFTILCISNIKAASSCNNTVPSNSSTTIPSNYTTTPFYSPAHFFNFTITPSNSSTPIPSNSTAIPSNSTTTPYNSSTTIPSNSSNSTIPSNSTTFPSNSSTPIPSNSSIIIPSNSTTINENTTIPQNQTFITYLKGSCNSTTYPSLCYSSLLPYASKIEGDNFKLCNISLTLALKAAYSASSTITKLSCNNNLTETEASVVQDCLDNAKDSIEQLLQSLQAMEHLDGIDKEFQLSSIKTWVSAAITDYSTCSDGFDEQNLDGTVRDKIRKKILNAERMTSNALYFINNLPY | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva09g01738 | 309 | MobiDBLite | consensus disorder prediction | 73 | 124 | - | - | |
Bva09g01738 | 309 | Pfam | Plant invertase/pectin methylesterase inhibitor | 152 | 301 | IPR006501 | GO:0004857 | |
Bva09g01738 | 309 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 128 | 304 | - | - | |
Bva09g01738 | 309 | CDD | PMEI-like_3 | 155 | 308 | - | - | |
Bva09g01738 | 309 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR | 128 | 304 | - | - | |
Bva09g01738 | 309 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 151 | 307 | IPR035513 | - | |
Bva09g01738 | 309 | Coils | Coil | 223 | 243 | - | - | |
Bva09g01738 | 309 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 150 | 308 | IPR035513 | - | |
Bva09g01738 | 309 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 150 | 307 | IPR006501 | GO:0004857 | |
Bva09g01738 | 309 | SMART | PMEI_2 | 147 | 303 | IPR006501 | GO:0004857 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva09g01738 | Bva-Chr9 | 11226389 | 11227318 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva09g01738 | 133 | 307 | Carbohydrate Esterase | AT1G53830 | 32.979 | 6.67e-16 | 76.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva09g01738 | - | - | gmx:100527443 | 226.868 |