Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01728 ATGGCAGCTGTGATTCCGGCGACTCAGAACAAGATCCGATGGGGGGAGCTAGAGGAGGATGACAGAGAGGATCTTGACTTTTTGCTGCCGCCGCGGCAGGTGATAGGTCCAGATGAGAACGGTATAAAGAAGGTGATTGAGTACAAATTCGATGAAGATGGCAATAAGGTGAAGATTACTACCACCACTCGCACTCGCAAGCTCGCTAATGCTCGCCTCAGTAAGCATGCCCTTGAGAAGCGATCCTGGGCTAAGTTCGGTGATGCTGTTCACGAGGATGTTGATAGTAGGCTCACCATGGTTTCCATTGAGGAAATCCTCCTCGAGCGACCTAGGCCTCCAGCTGTCATTTTGCCATCTCTTCAGTGGCTAAATAGTAGCTTGGAGAAGTTAGAAATTTCTAAAGAAGGGCAATCTAGCGTAGAGGGTCCAGTGAAGAGGATTGAAGGAGATGGGAGATTTTCCAATGCTgatttagagagagaagacGAGTGTGGGATCTGCTTGGAGCCTTGCACCAAAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACACAAGGTCAGAGTCTTGTCCATTTTGTCGAGGTAGCTTGAGGAGAGTTAATTCAGAGCATTTATGGGTGCTCACTTGTAATGAAGACGTTGTTGATGCTGAGACAGTTTCCAAGGAGGACTTGTCGCGTTTCTACCTCTATATCAACAGCCTACCTAAAGATTATCCAGATGCACTTTTCTTAATGTATTATGAATACCTCATTTG 785 0.4548 MAAVIPATQNKIRWGELEEDDREDLDFLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTTTRTRKLANARLSKHALEKRSWAKFGDAVHEDVDSRLTMVSIEEILLERPRPPAVILPSLQWLNSSLEKLEISKEGQSSVEGPVKRIEGDGRFSNADLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKW 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01728 192 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 9 114 - -
Bva09g01728 192 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 9 114 - -
Bva09g01728 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 192 IPR013083 -
Bva09g01728 192 Pfam Eukaryotic translation initiation factor 3 subunit G 33 117 IPR024675 -
Bva09g01728 192 ProSitePatterns Zinc finger RING-type signature. 180 189 IPR017907 -
Bva09g01728 192 SUPERFAMILY RING/U-box 157 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01728 Bva-Chr9 11097444 11098966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01728 10 115 Eukaryotic Initiation Factors Gene Family AT3G11400 69.811 3.89e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01728 K03248 - gmx:100776807 172.94