Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01727 ATGGTCGGGTTgacaaaggaagaagatgagtCATTAAGAAGTGCATTTCATACTGTGAAGCCAACCCCCCGTTTCTGGAGAGATGTAACTAAACTGCTACCTGGAAAGTCTGCACAGGATTGCTTTGATAGGTTTTACAGTTTACATTCACCGCCATTGACATCCAAACATAAATCAAGGGCAAAGCAAATGAAATCCCCATCTGAAGAGCAAGTTTCAGTTGTTCTTGAGCCAGATGGAGAAGACTTGTTTTATGTTCTTGAGccagattcaaaattttcttgtaatgTTCTTCAGCCTagtaatgagaaaaaagaagagcaaGAATTACATCAAATTTGCTCTGGGGCATCATCTTCAGCCCATAAGAAATCCCTTTCAACATTTGGTAACTCATCCTCAACAAATCCTCCAAATCCACAAGCAATAAAGCAGGTCAAAATCAAGTCACTACATGAGAAGTATATTGCGAAATTACTCCGCAGAAATACTAGAAGAAGAACTGAACGGGGAAAGAAGTCTATTACTAAAACCCCAGTCAAGGAAGAAAGCAAAGTTCAGAAGCAAATTAAGGAGGCAAGAAACGCCCTGATGTCTCACGCTAGAGAAGCCATTGATAAGTTTCAGAAATA 632 0.3608 MVGLTKEEDESLRSAFHTVKPTPRFWRDVTKLLPGKSAQDCFDRFYSLHSPPLTSKHKSRAKQMKSPSEEQVSVVLEPDGEDLFYVLEPDSKFSCNVLQPSNEKKEEQELHQICSGASSSAHKKSLSTFGNSSSTNPPNPQAIKQVKIKSLHEKYIAKLLRRNTRRRTERGKKSITKTPVKEESKVQKQIKEARNALMSHAREAIDKFQK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01727 210 MobiDBLite consensus disorder prediction 173 187 - -
Bva09g01727 210 PANTHER OS01G0581900 PROTEIN 81 210 - -
Bva09g01727 210 Gene3D - 4 69 - -
Bva09g01727 210 CDD SANT 5 48 IPR001005 -
Bva09g01727 210 PANTHER OS01G0581900 PROTEIN 3 73 - -
Bva09g01727 210 MobiDBLite consensus disorder prediction 53 72 - -
Bva09g01727 210 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 81 210 - -
Bva09g01727 210 MobiDBLite consensus disorder prediction 162 187 - -
Bva09g01727 210 Pfam Myb-like DNA-binding domain 5 48 IPR001005 -
Bva09g01727 210 SUPERFAMILY Homeodomain-like 5 53 IPR009057 -
Bva09g01727 210 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 3 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01727 Bva-Chr9 11091483 11095356 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva09g01727 Myb_DNA-binding 9.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01727 - - gmx:100777884 140.584