Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01693 ATGTCTGCCAATGTTTCGGAGATGATAAGGAACAGCTTAGCCATGAATGGGTTTTTCATGAATCTAGAGAGAGCAAGGAATTACACAGAAGCAACAGAGGATGTGTTTCCCAGTTGGGTTTCAGGGAATGAGAGGAAGCTTTTGCAGGGTTCTTCTTCCATTAGGGCCCATCTTGTAGTGGCCAAAGATGGTTCGGGGCACTTCAAGACGGTGCAAGCAGCCATTGATGCAGCGGCAAGGAGGAGAATCAAGAGCAGATTTGTGATACATGTGAAGAAAGGAGTTTATAAGGAAAACATTGAGGTTGATAAGTTCAACGATAACATCATGCTGATCGGTGATGGGATGAGAAATACCATAATCACTGGTGCAAGAAGCGTTCAAGATGGATTTACAACTTATAGCTCTGCTACAGCTGGTGTGGGAGGGGTCAATGATACGAATGAAACCACTTA 455 0.4418 MSANVSEMIRNSLAMNGFFMNLERARNYTEATEDVFPSWVSGNERKLLQGSSSIRAHLVVAKDGSGHFKTVQAAIDAAARRRIKSRFVIHVKKGVYKENIEVDKFNDNIMLIGDGMRNTIITGARSVQDGFTTYSSATAGVGGVNDTNETT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01693 151 Gene3D - 51 149 IPR012334 -
Bva09g01693 151 Pfam Pectinesterase 58 143 IPR000070 GO:0030599|GO:0042545
Bva09g01693 151 PANTHER PECTINESTERASE 1 144 - -
Bva09g01693 151 PANTHER PECTINESTERASE 1 144 - -
Bva09g01693 151 SUPERFAMILY Pectin lyase-like 54 143 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01693 Bva-Chr9 10690574 10691503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01693 5 145 Carbohydrate Esterase AT5G51500 59.859 9.47e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01693 K01051 - gmx:100807908 192.971