Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01692 ATGCTCATTCAACTGTCATTAGACCAAGCATTCACCATGCAAAAGAGTGTCCACAGCTATGCAGCAAAATGGGATACAAAGAAGCAGGAAACTGTATTCAGCGATTGTGTGAAACTCTATGACAACACCATCTTCCATCTAAACCGAACCCTTAAAGGGCTACGCAGAAAGAGAAGTTGTTCAACCTCTGATGCACAAACATGGCTCAGCACTGCTCTTACAAACCTAGAAACCTGCAAAACGGGAGCCAACGACCTTAGTGTTCCTGATTTCTTGGAACCTTTGGTGTCTGGCAATGTTTCGGAGATGATAAGGAACAGCTTAGCCATGAATGGGTTTTTCATGaatctagagagagaaaggaattACACAGAAGCAACAGAGGATGTGTTTCCCAGTTGGGTTTCAGGGAATGAGAGGAAGCTTTTGCAGGGTTCTTCTTCCATTAGGGCTCATCTTGTGGTGGCCAAAGATGGTTCAGGGCACTTCAAGACGGTGCAAGCAGCCATTGATGCAGCGGCAAGGAGGAGAATCAAGAGCAGATTTGTGATACATGTGCAGAAAGGAGTTTATAAGGAAAACATTGAGGTTGATAAGTTCAACGATAACATCATGCTGATTGGTGATGGGATGAGAAATACCATAATCACTGGTGCTAGAAGCGTTCAAGATGGATTTACAACTTATAGCTCTGCTACAGCTGGAATCGATGGGCTTCACTTCATTGCCCGTGACATAACCTTTCGAAATACGGCTGGTCTGCTCAAGGGACAAGCCGTGGCGCTCCGGTCGGCATCGGATCTCTCTGTCTTCTACCGGTGCGCCATTATAGGTAGCCAAGACACTCTCATGGTCCATGCACAGAGACAATTCTACAGAGAATGCAGTATCTATGGCACCGTAGATTTCATCTTTGGCAATGCTGCTGTTGTTTTCCAAAATTGCATGATTTACGTGAAGAAACCATTATCGGGCCAAGCAAATATGATCACGGCCCAAGGTCGAAACGACCCGTTTCAGAACACGGGAATTTCGATCCACAAATGTCAAATCCGGGCCGCTCCAGATCTCAGACCCGTTGTTGGGACGATCCAAACCTACCTTGGTCGGCCTTGGCAGGAATATTCCAGAGTAATGGTCATGCAGACATTTATTGACAACTTAGTGAGCCCATTGGGCTGGAGCCCATGGGGCAACAGTGATTTTGCTCTCAAGACATTATATTATGGGGAGTATAAGAATTATGGGCCCGGTTCATCAACAACGAACCGGGTTCGATGGCCCGGTTTTCATGTAGTCACAAATCCCAACGAGGCTTCGCGGTTCACTGTTTCTGGCCTTCTAGCTGGTCGCACGTGGTTGCCAACCACCGGAGTGCCATTCACTATAGGCATTTG 1397 0.4617 MLIQLSLDQAFTMQKSVHSYAAKWDTKKQETVFSDCVKLYDNTIFHLNRTLKGLRRKRSCSTSDAQTWLSTALTNLETCKTGANDLSVPDFLEPLVSGNVSEMIRNSLAMNGFFMNLERERNYTEATEDVFPSWVSGNERKLLQGSSSIRAHLVVAKDGSGHFKTVQAAIDAAARRRIKSRFVIHVQKGVYKENIEVDKFNDNIMLIGDGMRNTIITGARSVQDGFTTYSSATAGIDGLHFIARDITFRNTAGLLKGQAVALRSASDLSVFYRCAIIGSQDTLMVHAQRQFYRECSIYGTVDFIFGNAAVVFQNCMIYVKKPLSGQANMITAQGRNDPFQNTGISIHKCQIRAAPDLRPVVGTIQTYLGRPWQEYSRVMVMQTFIDNLVSPLGWSPWGNSDFALKTLYYGEYKNYGPGSSTTNRVRWPGFHVVTNPNEASRFTVSGLLAGRTWLPTTGVPFTIGI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01692 465 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 113 IPR035513 -
Bva09g01692 465 PANTHER PECTINESTERASE 1 464 - -
Bva09g01692 465 Pfam Pectinesterase 153 450 IPR000070 GO:0030599|GO:0042545
Bva09g01692 465 PANTHER PECTINESTERASE 1 464 - -
Bva09g01692 465 Pfam Plant invertase/pectin methylesterase inhibitor 2 110 IPR006501 GO:0004857
Bva09g01692 465 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 109 IPR006501 GO:0004857
Bva09g01692 465 ProSitePatterns Pectinesterase signature 2. 297 306 IPR033131 -
Bva09g01692 465 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 115 IPR035513 -
Bva09g01692 465 CDD PMEI-like_3 1 111 - -
Bva09g01692 465 SMART PMEI_2 1 110 IPR006501 GO:0004857
Bva09g01692 465 Gene3D - 146 465 IPR012334 -
Bva09g01692 465 SUPERFAMILY Pectin lyase-like 149 464 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01692 Bva-Chr9 10672853 10675102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01692 1 465 Carbohydrate Esterase AT5G51490 59.958 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01692 K01051 - gmx:100807908 687.567