Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01691 ATGGCTAAGAATATTAGCCTAGTCATTTTCCTTCTAgccttgttttctttgtccTCTCCAGCATTTTCAAGCTTTCACTCTAGCGCTATCGATTATTGGTGTAAAGCAACTCCACACCCTGCAACATGCCAACACTATGCCAGAAGCCATAAGCTGCATAATGGTTTCAAAAGTGCTTCTCAGTTCAAGAAATTCTTCCTCAACATTGCCATAGATCAATCTCTTAAAGCCCAAAATCACAACAAGGGTCTGGGCTATAAATCTCGAAATAAGCAAGAAAAGACTGCTTGGAGTGATTGTTTGAAGCTTTACCAAGACACCATCACCACCCTCAATCAAACCCTAGACCCTGCCACAATGGCCACGGATTATGATGTCCAAACCTGGCTCAGCACATCCCTCACCAACCTTGACACATGCCGGACCGGGTTCGTGGAACTCGGCGTTAAGGACAACATTCTCCCTCTCTTACCCAACCAGAATCTTTCAGAGATCATAAGCACTACATTGGCTCTAAATAATGCGTCTTCAGCTCCAGCAGTGACTAACAGTTACAAAGAGGGATTCCCAAGTTGGGTCTCTCCCCGTGACCGGAAGCTGTTGCAGGCTCCCTCCCCGGCACCGGATATCGTGGTGGCGAAAGATGGATCAGGGCATTATAGGACGGTGAAAGAGGCTATTGCGGCTGCTTCAAAGAGAAGTGGCACTAAGAGGTTTGTGATATATGTTAAATCAGGTGTATACGATGAGAATGTGGAGATTGGCAAGAGTTTGAAGAATATTATGATGTATGGTGATAGCATGAGGCTTACAGTCATAACTGGTAGCCGTAGTGTTGTGGGAGGTTCCACCACTTTCGACTCTGCAACTGTTTCTGTTACCGGAGATGGCTTCATTGCCCGTGGCATCACATTCCGTAACACTGCAGGACCCCAAAACCACCAAGCCGTGGCCCTACGTTCCGGTGCTGATCTCTCAGTCTTCTATCGCTGTGGCTTTGAAGGCTACCAAGACACTCTCTACGTTCACTCCCAGAGACAATTCTATAAAGAATGTTACATTTACGGCACAGTCGATTTCATCTTCGGCAATGCCGCTTCTGTCTTCCAAAACTGCATGATCTACGCAAGAAGACCAATGGACAAACAGAAAAACACCATAACAGCACAAGGCAGAACCGATCCGAATCAAAACACTGGCATAATCATCCACAACTCTCGCGTTATGGCGGCTCCTGACCTCGTCCCGGTCCTAAGCTCCTTCAAAACCTTCTTGGGTCGACCATGGAAGGAGTACTCAAGAACTGTGTTCTTGAAAACCTACTTGGATTCATTGGTAGACCCTGCAGGGTGGTTAGAGTGGAATGGAGATTTTGCTCTTAACACTTTGTATTATGGTGAGTATAGGAACCTTGGACCGCGAGCTTCGACGAGTAGTAGGGTTAAGTGGCGTGGATACCATGCGATAACTAGTGAAACAGAAGCATCAAAGTTCACAGTTCAGAATTTCATTGCAGGGAACTCATGGTTGCCAGCCACAGGGATACCCTTCTATCCAGgactttg 1565 0.4588 MAKNISLVIFLLALFSLSSPAFSSFHSSAIDYWCKATPHPATCQHYARSHKLHNGFKSASQFKKFFLNIAIDQSLKAQNHNKGLGYKSRNKQEKTAWSDCLKLYQDTITTLNQTLDPATMATDYDVQTWLSTSLTNLDTCRTGFVELGVKDNILPLLPNQNLSEIISTTLALNNASSAPAVTNSYKEGFPSWVSPRDRKLLQAPSPAPDIVVAKDGSGHYRTVKEAIAAASKRSGTKRFVIYVKSGVYDENVEIGKSLKNIMMYGDSMRLTVITGSRSVVGGSTTFDSATVSVTGDGFIARGITFRNTAGPQNHQAVALRSGADLSVFYRCGFEGYQDTLYVHSQRQFYKECYIYGTVDFIFGNAASVFQNCMIYARRPMDKQKNTITAQGRTDPNQNTGIIIHNSRVMAAPDLVPVLSSFKTFLGRPWKEYSRTVFLKTYLDSLVDPAGWLEWNGDFALNTLYYGEYRNLGPRASTSSRVKWRGYHAITSETEASKFTVQNFIAGNSWLPATGIPFYPGL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01691 521 PANTHER PECTINESTERASE 7 520 - -
Bva09g01691 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 174 IPR035513 -
Bva09g01691 521 ProSitePatterns Pectinesterase signature 1. 235 254 IPR018040 -
Bva09g01691 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 175 IPR035513 -
Bva09g01691 521 Gene3D - 205 521 IPR012334 -
Bva09g01691 521 CDD PMEI-like_3 33 175 - -
Bva09g01691 521 ProSitePatterns Pectinesterase signature 2. 354 363 IPR033131 -
Bva09g01691 521 PANTHER PECTINESTERASE 7 520 - -
Bva09g01691 521 SUPERFAMILY Pectin lyase-like 205 520 IPR011050 -
Bva09g01691 521 Pfam Pectinesterase 209 507 IPR000070 GO:0030599|GO:0042545
Bva09g01691 521 Pfam Plant invertase/pectin methylesterase inhibitor 29 172 IPR006501 GO:0004857
Bva09g01691 521 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 174 IPR006501 GO:0004857
Bva09g01691 521 SMART PMEI_2 25 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01691 Bva-Chr9 10666884 10669642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01691 8 521 Carbohydrate Esterase AT2G45220 58.560 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01691 K01051 - gmx:100776412 765.763