Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01687 ATGGATTTGAACTCAAATCATACTCCCGTTCTCACTGATACTGCACCAATAACGAAGTCAAGGCTATGTGTGCATTCTAGTCTGTTGCCTTATTCCGCCACAGGGGCAACTTTTCAGCATGGCTTGTTTCTGACAATTCCAAGGAAGAAGACGGGAATTCTTGGTGATGTTCGTTCTGGTGGTTGGCTGGATGCTATGAAATCATCTTCTCCTCCACCCAAGAAGATTACAAAGGATGTTAATCACGAGTTTTCATCAGCTGATGTTGATGATGCTTACAGCACCTGGCTGCTGAAGTATCCATCAGCGCTTACATCTTTTGAGCAAATCACAAACCCTTCAAAAGGCAAAAGAATAGCATTGTTTCTGGATTATGATGGAACACTTTCACCAATTGTGGATAACCCTGACTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAGGCAGCAGAATATTTCCCAACGGCAATTATTAGTGGTAGAAGCCGTGACAAGGTATATAAATTTGTAGGACTAACCGAACTCTATTATGCGGGTAGTCATGGAATGGATATCATTGGTCCTGTCAGACAATCTATATCTGATAACCACCCTAATTGCATCAGGTCTACTGACAAGCAGGTGCTTGTCTCTGAAGTTTCTATTTTACCTCATAATCTAATGGGCAAGGAAGTTAATTTATTCCAACCCGCTGCCGAGTTCTTACCAATGATTGATGAGGTGTTGACATTGCTTGTCGAACGCACAAAAGATATTGAAGGAGCAAAAGTTgagaacaataaattttgtgtttCTGTGCATTACCGCAATGTAAATGAGAAGAATTGGGATACAGTGGGAAAATGTGTCCATGATATTCTAAAGGACTATCCGCGATTACGACTAACTCACGGGCGCAAGGTTTTAGAGATCCGACCAGTGATTGACTGGGATAAAGGGAAAGCAGTCACATTCTTACTTGAGTCACTTGGACTTAGCAATTGCGAAGACGTGCTCCCTATATATGTGGGAGATGACAGTACAGATGAAGATGCATTTAAGGTTTTGAGAGAGGAAACTAGAGGTTATGGGATCTTGGTGTCTTCTACGCCCAAAGAAAGTAATGCAGTTTACTCTCTTCGCGATCCATCAGAGGTCATGGAGTTTCTCAAGTCACTTGTGGAAACAGACCAAGAGGTTTCCTGGAGCATATTTTGGCACAGAAGACCTCTTAGAATTATTGCTACTTGGTTTGTTTTGCTCAAAACTCTTGTGGCAACTGTAAATTCATA 1280 0.4117 MDLNSNHTPVLTDTAPITKSRLCVHSSLLPYSATGATFQHGLFLTIPRKKTGILGDVRSGGWLDAMKSSSPPPKKITKDVNHEFSSADVDDAYSTWLLKYPSALTSFEQITNPSKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKAAEYFPTAIISGRSRDKVYKFVGLTELYYAGSHGMDIIGPVRQSISDNHPNCIRSTDKQVLVSEVSILPHNLMGKEVNLFQPAAEFLPMIDEVLTLLVERTKDIEGAKVENNKFCVSVHYRNVNEKNWDTVGKCVHDILKDYPRLRLTHGRKVLEIRPVIDWDKGKAVTFLLESLGLSNCEDVLPIYVGDDSTDEDAFKVLREETRGYGILVSSTPKESNAVYSLRDPSEVMEFLKSLVETDQEVSWSIFWHRRPLRIIATWFVLLKTLVATVNS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01687 426 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 353 IPR006379 -
Bva09g01687 426 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 392 IPR044651 GO:0004805|GO:0005992
Bva09g01687 426 CDD HAD_TPP 120 384 - -
Bva09g01687 426 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 392 - -
Bva09g01687 426 Pfam Trehalose-phosphatase 122 380 IPR003337 GO:0003824|GO:0005992
Bva09g01687 426 SUPERFAMILY HAD-like 120 390 IPR036412 -
Bva09g01687 426 TIGRFAM T6PP: trehalose-phosphatase 233 390 IPR003337 GO:0003824|GO:0005992
Bva09g01687 426 Gene3D - 235 400 IPR023214 -
Bva09g01687 426 Gene3D - 119 217 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01687 Bva-Chr9 10559126 10564639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01687 115 389 Trehalose Biosynthesis Gene Families AT1G70290 24.573 3.86e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01687 K01087 - gmx:100819495 630.557