Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01675 ATGATGAATTCAAGTGCAGAAAGTCAACTTAGCTCTCAATGGAAAAGCCCAACTGGGACTAGATCCAGGCGCCGCCCAAGATTTATGGTAGCAGAGGCTGAGGCCGAGGCGAAAGAAGCAAaggaagaacaagaagagagTTTCATACCGGATCCTGATATGCAACATGCAGCACAAACTCTAATTGGGTTGTCCATGGGAAGCACAGAGCTGATAAAGGGAGAACCAAGAGTGACTACAGACTtggtggaggaggaggaagacAACATTCAATTGACTGAATTTGATAATGAAGAAGCGGTTAGTGTTCAAGCCCCTGATAAGCCGCTTGACAAGAAGTTGAAGAGCAAAGTTGAAGAGGATGATTATGAAGATGACGAAAACAACAATGCTGGTGGCGATGGCGGCAGCGACAGCGACAGCGATGCTGTCCAAGATGGGAAGAGACATCAATGCCCAGTTTGCTTGAAAATGTTTGCATCTGGTCAAGGGCTTGGTGGACACAAGAGAGTCCACATTCCAAAGTCTGGTGCTGGTAAAGGTAATAAGCCTTCTACTTCTAGTGCTGGTAAAAGTGACAAGCCTTCTGCTGCCAAATTAAGACCATGTTTGTATCATAATCTGCCTCCTCCTGAGACAGATGAAGAGGTAATCTCCATCGTAGATCTCTCAACTTCGTCCAGTGACGAAGAGTTATTTGGATA 704 0.429 MMNSSAESQLSSQWKSPTGTRSRRRPRFMVAEAEAEAKEAKEEQEESFIPDPDMQHAAQTLIGLSMGSTELIKGEPRVTTDLVEEEEDNIQLTEFDNEEAVSVQAPDKPLDKKLKSKVEEDDYEDDENNNAGGDGGSDSDSDAVQDGKRHQCPVCLKMFASGQGLGGHKRVHIPKSGAGKGNKPSTSSAGKSDKPSAAKLRPCLYHNLPPPETDEEVISIVDLSTSSSDEELFG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01675 234 MobiDBLite consensus disorder prediction 1 19 - -
Bva09g01675 234 MobiDBLite consensus disorder prediction 1 148 - -
Bva09g01675 234 Pfam C2H2-type zinc finger 149 172 - -
Bva09g01675 234 SUPERFAMILY beta-beta-alpha zinc fingers 147 174 IPR036236 -
Bva09g01675 234 MobiDBLite consensus disorder prediction 25 50 - -
Bva09g01675 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 177 IPR013087 -
Bva09g01675 234 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 4 215 - -
Bva09g01675 234 MobiDBLite consensus disorder prediction 164 216 - -
Bva09g01675 234 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 4 215 IPR044303 GO:0006355
Bva09g01675 234 MobiDBLite consensus disorder prediction 105 120 - -
Bva09g01675 234 ProSitePatterns Zinc finger C2H2 type domain signature. 152 172 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01675 Bva-Chr9 10413656 10414360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01675 143 222 C2H2 Transcription Factor Family AT2G45120 38.750 3.04e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01675 - - mnt:21398361 63.929