Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01640 ATGGCGATGgctccatcttcttcttcttcttctgtcaCTTCCCGGTTTCAACACTCTGTCTCCAAAAATGCCCTCCGTTCATACCTCGCCGAGTTCATCTCAACATTCGTTTATGTCTTCGCAGTTGTCGGCGCAGGCATGTCATCCCGGAAATTGATGCCTAATGCTTCATTAGAACCAACAAGCCTAGTTGTGGTGGCCATTGCAAACGCCTTTGCCCTGTCATCAGCCATGTACATTGCATGGGACATCTCCGGCGGCCACGTCAATCCGGCGGTTACCTTTGGAATGGCCGTCGGTGGCCACATCAGCGTTCCAATGGCTCTGTTTTACTGGATCTCTCAGTTGGTAGCCTCCTTCATGGCTTGCCTTGTTCTGAGGGTAACCGTAGTTGGAATGCATGTCCCAGCATATGCTATTGCTGCAGAGATGACAGGCTTTGGGGCATCCATATTAGAGGGTGTCctaacatttggtttggtgTACACTGTCTATGCTGCCAGGGACCCTAGGCGTGGTTCACTAGGTTCCATTGGCACCCTAGCCATAGGGTTCATGGCCGGAGCAAATGTCTTGGCCACCGGTCCATTCTCCGGCGGGTCAATGAACCCGGCATGCGCCTTCGGCATGGCCGCCGTTGCTGGCAGTTTCAGGAATCAAGCAGTGTATTGGGTTGGACCCTTGATTGGTGCTGCTATTGCTGGACTTCTTTATGACAATGTGGTGTTCCCTTATTCTCAGCCTGCAGATTCTCTTAGAGGAAGTGCACAAGGGAATAATgaggttta 788 0.486 MAMAPSSSSSSVTSRFQHSVSKNALRSYLAEFISTFVYVFAVVGAGMSSRKLMPNASLEPTSLVVVAIANAFALSSAMYIAWDISGGHVNPAVTFGMAVGGHISVPMALFYWISQLVASFMACLVLRVTVVGMHVPAYAIAAEMTGFGASILEGVLTFGLVYTVYAARDPRRGSLGSIGTLAIGFMAGANVLATGPFSGGSMNPACAFGMAAVAGSFRNQAVYWVGPLIGAAIAGLLYDNVVFPYSQPADSLRGSAQGNNEV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01640 262 Pfam Major intrinsic protein 21 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g01640 262 PANTHER AQUAPORIN-8 11 258 IPR034294 -
Bva09g01640 262 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Bva09g01640 262 Gene3D Glycerol uptake facilitator protein. 10 249 IPR023271 -
Bva09g01640 262 PANTHER AQUAPORIN TIP5-1-RELATED 11 258 - -
Bva09g01640 262 SUPERFAMILY Aquaporin-like 18 245 IPR023271 -
Bva09g01640 262 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g01640 262 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g01640 262 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g01640 262 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g01640 262 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva09g01640 262 PRINTS Major intrinsic protein family signature 107 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01640 Bva-Chr9 10070817 10072489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01640 10 259 Major Intrinsic Protein MIP AT3G47440 64.800 4.47e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01640 K09873 - gmx:100801448 390.193