Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01618 ATGGGTTTTCGATTACCTGGTATCAGAAGAGCATCATTCGCTGCAACCCAAGCAGCTTCCAAGTCAGTTGAAGTCCCGAAAGGTTATATTGCAGTTTATGTTGGGAAGGAAATGAAGCGGTTCATGGTTCCAATATCATACTTAAACCATTCGTCATTCCAAGAATTGCTCAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTTACAATCCCTTGCAGAGAACAAGTGTTCTTAGATGTCACTTCTAGCTTGAATAGGCAATG 278 0.4209 MGFRLPGIRRASFAATQAASKSVEVPKGYIAVYVGKEMKRFMVPISYLNHSSFQELLSQAEEEFGYDHPMGGLTIPCREQVFLDVTSSLNRQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01618 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 91 IPR003676 GO:0009733
Bva09g01618 92 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Bva09g01618 92 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01618 Bva-Chr9 9865847 9866125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01618 14 82 Calmodulin-binding Proteins AT3G43120 50.725 1.59e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01618 K14488 - gmx:100806671 153.68