Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01616 ATGGGTTTTCGATTACCTGGTATCAGAAGAGCATCATTCGTTGCAACCCAAGCAGCTTCTAAGTCAGTTGAAGTCCCAAAAGGTTATATTGCAGTTTATATTGGGGAGGAAATGAAGCGGTTCATGGTTCCAATATCATACTTAAACCATTCTTCATTCCAAGAATTGCTCAGTCAAGCTGAAGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTTACAATCCCTTGCAGAGAACAAGTGTTCTTAGATGTCATTTCTAGCTTGAATAGGCAATG 278 0.4029 MGFRLPGIRRASFVATQAASKSVEVPKGYIAVYIGEEMKRFMVPISYLNHSSFQELLSQAEEEFGYDHPMGGLTIPCREQVFLDVISSLNRQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01616 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
Bva09g01616 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 91 IPR003676 GO:0009733
Bva09g01616 92 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01616 Bva-Chr9 9848090 9848368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01616 14 82 Calmodulin-binding Proteins AT3G43120 49.275 3.24e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01616 K14488 - gmx:112998524 152.14