Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01610 atggGTTTTCGCTTGCTAGGTTTGCAGAGGCGCGTTGATATCCCAAAGGGTTATCTTGCTGTTTATGTGGGAGAGAACCAGAAGAAGCGGTTTCTAATTCCCATATCACACTTGAATGAACCTTCATTTCAAGATTTGCTGAGTCAAGCTGAGCAGGAATTTGGATATAATCATCCAATGGGTGGCCTTACAATTCCTTGCTCAGAAGATGTCTTCCTAGAGATCATTTCTTGCTTGCAAAGATCATA 248 0.4113 MGFRLLGLQRRVDIPKGYLAVYVGENQKKRFLIPISHLNEPSFQDLLSQAEQEFGYNHPMGGLTIPCSEDVFLEIISCLQRS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01610 82 Pfam Auxin responsive protein 12 79 IPR003676 GO:0009733
Bva09g01610 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 79 IPR003676 GO:0009733
Bva09g01610 82 PANTHER - 13 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01610 Bva-Chr9 9806776 9807024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01610 13 81 Calmodulin-binding Proteins AT4G34750 44.928 8.72e-17 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01610 K14488 - gmx:100527277 141.739