Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01607 ATGGGTTTCCGTATACCCGGTATTAGAAGAGTTTCATTCTCTGCAAACCATGTGTCTGCAAAAGCTGTGGATGTTCCAAAGGGCTATCTTGCAGTCTATGTTGGGGAAAAAATGAAACGGTTTGTGATTCCCTTATCATACTTGAACCAACCAAAGTTCCAAGATTTGTTGAGTCAAGCTGAGGATGAATTCGGTTACGATCATCCCAAGGGCGGTCTCACAATACGTTGCAGAGAAGATGTGTTCCTGAATATCACTTCTAGCTTGAATGGGTG 275 0.4291 MGFRIPGIRRVSFSANHVSAKAVDVPKGYLAVYVGEKMKRFVIPLSYLNQPKFQDLLSQAEDEFGYDHPKGGLTIRCREDVFLNITSSLNG 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01607 91 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Bva09g01607 91 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Bva09g01607 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01607 Bva-Chr9 9801031 9801306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01607 24 82 Calmodulin-binding Proteins AT3G43120 54.237 7.91e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01607 K14488 - gmx:100817347 152.525