Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01602 ATGGGTTTCCGCTTACCCGGTATTAGAAGGGCATCATTTACTGCAATCCCGGCAGCTTCCAAACCTGTTGAAGTCCCAAAAGGGCACCTTGCAGTTTACGTTGGACAAGAAATGAAGCGGTTCATCATTCCCATATCATACCTGAGCCAACCTTTGTTCCAAGAATTACTAAGTCAAGCTGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTTACAATTCCTTGCAGGGAGAATGAGTTTGTAGACCTCTTGTCTCGTCTGAATATGCAATA 278 0.4388 MGFRLPGIRRASFTAIPAASKPVEVPKGHLAVYVGQEMKRFIIPISYLSQPLFQELLSQAEEEFGYDHPMGGLTIPCRENEFVDLLSRLNMQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01602 92 Pfam Auxin responsive protein 19 89 IPR003676 GO:0009733
Bva09g01602 92 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 91 - -
Bva09g01602 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01602 Bva-Chr9 9787035 9787313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01602 22 86 Calmodulin-binding Proteins AT5G20810 63.077 5.99e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01602 K14488 - gmx:100806671 154.066