Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01601 ATGGGTTTCCGCTTACCTGGTATTAGAAGAGCCCTTTTTTCCGCAACCCAAGCAGCTTCCAAGTCAGTTGGCGTCCCAAAAGGATACCTGGCAGTTTATGTTGGGGAAGAAATGAGACGGTTTGTCATTCCTATATCATACTTGAACCAACCTGCATTTCAAGAATTGCTAGGCCAagctgaagaagaatttggGTATGGTCATCCAGCTGGTGGTCTCACAATTCCTTGCAGAGAGGATGTGTTTGTAGAACTCATTTCAAGATTGAATGGGAAATA 278 0.4137 MGFRLPGIRRALFSATQAASKSVGVPKGYLAVYVGEEMRRFVIPISYLNQPAFQELLGQAEEEFGYGHPAGGLTIPCREDVFVELISRLNGK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01601 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
Bva09g01601 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Bva09g01601 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01601 Bva-Chr9 9781524 9781802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01601 14 86 Calmodulin-binding Proteins AT3G43120 49.315 9.61e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01601 K14488 - gmx:100806671 152.14