Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01575 ATGGCTTCGGAGAAGAAATTGTCGAACCCCATGAGGGAGATCAAGGTCCAGAAGCTGGTCCTCAACATCTCCGTTGGCGAGAGTGGAGATCGTCTAACCAGAGCTGCCAAGgtGCTGGAGCAACTTAGTGGCCAAACCCCAGTTTTCTCCAAAGCAAGATACACTGTTCGGTCCTTTGGGattagaagaaatgaaaagattgCATGCTACGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAAAGTGGTTTGAAGGTTAAGGAATATGAACTTCTGAGAAGGAACTTCAGTGATACTGGATGCTTCGGCTTTGGTATTCAAGAGCATATTGATTTGGGAATCAAGTATGATCCTTCCACTGGTATTTATGGAATGGACTTCTTTGTTGTTCTGGAGCGCCCGGGATATCGCGTGGGACGTCGCCGGAGGTGCAAGTCTCGCGTAGGCATCCAGCACCGCGTCACCAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATCCTTAACAAGTCGCAGGCAATTGTTGGTTA 548 0.469 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIVG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01575 182 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 180 - -
Bva09g01575 182 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bva09g01575 182 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Bva09g01575 182 Gene3D - 2 177 IPR022803 -
Bva09g01575 182 Pfam Ribosomal protein L5 9 62 IPR031310 -
Bva09g01575 182 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 180 IPR002132 GO:0003735|GO:0005840|GO:0006412
Bva09g01575 182 SUPERFAMILY RL5-like 8 173 IPR022803 -
Bva09g01575 182 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01575 Bva-Chr9 9548543 9550871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01575 1 182 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 95.055 5.45e-130 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01575 K02868 - gmx:100810082 342.428