Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01525 ATGAAGAGGTCTcttccttctccttcctcttcaTCGTCATCAACTTTCTCTGTTGTTGAGAATCTTAATGAACCGAGCCAAACGAGGCCTAAGCGTAAGAGGAGTAATCTAAGGCCTGAGAAATCTGAGAAGAAGGGAGGTAACAGTAACAGTAACAGCTCCAGCTCTGGAAGGAGAAGCTCCATTTACAGAGGAGTTACCAgGCATCGATGGACGGGGAGATATGAAGCTCATCTCTGGGACAAGACTTGCTGGAACAAAATGCAGAACAAGAAAGGAAGACAaggTGCATATGATAGTGAAGAGGCTGCAGCCCGCACCTATGATCTTGCTGCTCTCAAGTATTGGGGAAAGGAGACAATATTGAATTTTCCGAAAGAAGGATACACCAAGGAAATTGAGGAAATGGAGAAGGTGTCAAGAGAAGAATATTTGGCTTCATTGAGGAGACAAAGTAATGGATTTTCTAGAGGGGTTTCTAAGTATCGCGGCGTGGCCAGGCATCACCATAACGGCCGATGGGAAGCGAGGATCGGAAGAGTGTACGGGAACAAGTATCTCTACTTGGGTACTTTCAaCACTCAAGAAGAAGCTGCTGCTGCATATGACATTGCAGCTATAGAGTACCGAGGAATAAATGCGGTGACCAATTTTGACATAAGCAACTACATGGACATAGTAATGAAGAAAAGCTTAGAACCACCTCAAGAAAAACAAGCCCAGAAGATTCccaaaataaagaagagaaaaatggacCAAAACCAAATCCAAGAGACACGGATGGATCCCAAAACAACGAATCTAATCTACCAAACCCAAGAAACAGAGACCCAGAATGCACAAACAGATCCAAACATTTCCTCCTCTGAATCAGAAGCAGAAAAACCAGAACTTGAATTTCAGTTTCAGTCACCCAAAACAGAGTCTACCCCGATTCCCATTTCAGCAGAAGCTTCATCAATGGCTGCGATGGAGTCTGTGATGGAACAAGACCTTCAATGGAGCTTTTTGGATTCTGGGTTATCTCAATTTCAAGTCCCAGACCTGCCTCTAGCTAAATTAGAGTCTTTTCAGGGTATAATAGATGGTGCAGGGTTTGAGGAAGACATTGATTATCTATTCCAAGGAGAACCAGAAGAAAACGATTTCAGTTTGAAGGCAATATTGGAAAATTCAAGCTTTGGAGACACTTTTGGTGCAGCAACAAGCATGGTGGATAATGGGCaggaaaaattatcatatacttcttcttcttccccttctTCTTCGACAACTTCAATTTCTTGTAACTATTCTCTTTGTGCTTG 1307 0.4017 MKRSLPSPSSSSSSTFSVVENLNEPSQTRPKRKRSNLRPEKSEKKGGNSNSNSSSSGRRSSIYRGVTRHRWTGRYEAHLWDKTCWNKMQNKKGRQGAYDSEEAAARTYDLAALKYWGKETILNFPKEGYTKEIEEMEKVSREEYLASLRRQSNGFSRGVSKYRGVARHHHNGRWEARIGRVYGNKYLYLGTFNTQEEAAAAYDIAAIEYRGINAVTNFDISNYMDIVMKKSLEPPQEKQAQKIPKIKKRKMDQNQIQETRMDPKTTNLIYQTQETETQNAQTDPNISSSESEAEKPELEFQFQSPKTESTPIPISAEASSMAAMESVMEQDLQWSFLDSGLSQFQVPDLPLAKLESFQGIIDGAGFEEDIDYLFQGEPEENDFSLKAILENSSFGDTFGAATSMVDNGQEKLSYTSSSSPSSSTTSISCNYSLCA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01525 435 SUPERFAMILY DNA-binding domain 160 221 IPR016177 GO:0003677
Bva09g01525 435 CDD AP2 62 125 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 MobiDBLite consensus disorder prediction 1 25 - -
Bva09g01525 435 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 420 - -
Bva09g01525 435 ProSiteProfiles AP2/ERF domain profile. 62 125 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 420 - -
Bva09g01525 435 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 PRINTS Ethylene responsive element binding protein signature 201 221 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 SUPERFAMILY DNA-binding domain 61 126 IPR016177 GO:0003677
Bva09g01525 435 SMART rav1_2 62 131 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 SMART rav1_2 161 225 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 MobiDBLite consensus disorder prediction 46 62 - -
Bva09g01525 435 MobiDBLite consensus disorder prediction 1 63 - -
Bva09g01525 435 ProSiteProfiles AP2/ERF domain profile. 161 219 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 CDD AP2 160 221 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 Gene3D AP2/ERF domain 160 221 IPR036955 GO:0003700|GO:0006355
Bva09g01525 435 Gene3D AP2/ERF domain 62 126 IPR036955 GO:0003700|GO:0006355
Bva09g01525 435 MobiDBLite consensus disorder prediction 274 289 - -
Bva09g01525 435 MobiDBLite consensus disorder prediction 235 255 - -
Bva09g01525 435 MobiDBLite consensus disorder prediction 26 45 - -
Bva09g01525 435 Pfam AP2 domain 160 211 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 Pfam AP2 domain 62 117 IPR001471 GO:0003700|GO:0006355
Bva09g01525 435 MobiDBLite consensus disorder prediction 274 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01525 Bva-Chr9 8857959 8862737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01525 52 223 AP2-EREBP Transcription Factor Family AT5G57390 69.143 2.39e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bva09g01525 AP2 7.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01525 - - gmx:100789774 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01035 07 12010965 12014927 Bva09g01525 09 8857959 8862737 ECH
Bva09g01525 09 8857959 8862737 Bva09g01525 09 8857959 8862737 ECH