Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01523 atGGCGGAGGTCATGAACATGCCTTCGGATTCTCTCGACAAATCCCCCTCCGCTTCAGCTCCTCCTCCACAGGCGGCGCCGGTTGCTGCTGATGAGGATCTCCCTCCGCCGCCGCCATCATCGCACCCCCCTCCGCATTCTTCGTCCCGGAGAAGGGATAGGGATTCGAGGGATAGAAGAGATGATAGGGATTTTGATCGCCATCCGAATCGTCGAGGTGGTGGTGATTACTTTGACCGGAACATGTCTCCTCTGCCGCCtgcgagagagagagatagggaCCACAAGCGCCGTCGCAGCCCTAGCCCTTCCTATCGTGACCGGCGGTATTCCCCTCAACGTCGTTCACCTCCAGCGTTTAAGCGATCCAGAAGGGGGAGCCCTCGAGGTGGTTATGGACCTGATGACAGATTTGGATATGATTATTTTGGAGGCTATGATAGAGGAGTTGGTGGAAGACCCGGTTATACAGATGAGAAGTATGGGAGATTTGCACATCGTTCTGCTGGAGGCTATCAAAACGGGCTTTCTGACCTAGAATCAAATCGTGGTTATGCAGACTTACCAGGTGGTGGTACTCAAAGAGAGGGATTGATGTCCTATAAGCAATTTATTCAGGAGCTTGAGGATGATATATTACCTGCTGAAGCTGAGCGCAGgtatCAAGAGTACAAATCAGAGTACATTACTACCCAGAAACGGGCTTATTTTAATGCTCACAAGGATGAGGAAtgGTTGAGAGATAAATATCATCCAACAAATTTAGTTTCAGTCATTGAGAGGAGGAATGAAAATGCTCGACGACTGGCAAAAGATTTCCTGCTTGATTTGCAGAGTGGGACACTAGATCTAAATCCTGGTTTAAATGCCTCTTCATCCAGCAAATCAGGACAAGCTAGTGAACCAAATTCAGAAGAGGAAGCAGATGCTGGCAGCAAACGGAGAAGACATGGTAGGGAacctaataaagaaaatgatttctcAGCTGCTCCAAAAGCTCATCCAATCAGTTCTGAACCTAGACGAATACAAGCAGATATTGAACAGGTTCAGGCCCTTTTACGCAAACTTGACGCAGAAAAGGGTATTGAAGATAATGTTTTAAGCAGTAGTGATCACAAAAATGACGATAAGAACCACAGTGGATCTGTGGGACCTATAATAATTATACGAGGCTTAACATCTGTCAAAGGCTTAGAAGGTGCTGAGCTCCTTGACACTCTCATTACATATCTTTGGCGGATCCATGGTGTAGATTACTATGGCATGATTGAGACTAGCGAGGCTAAGGGTTTTAGACATGTGAGGCCAGAAGGAACAGGGCACGATGAAACAAGCAAACTAGGTTCTGAATGGGAAAAGAAACTTGATTCATTTTGGCAGGGAAGGTTGAGTGGTCAGGATCCCTTGGAAGTCATGACTGCTAAGGACAAGATAGATGCTGCAGCAGTTGAAGTGTTAGATCCATATGTCAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCCAAAGGCTGCACAAAGCTTTTCCATGCAGCTGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGACGTTGTAGTGGAATTAACATCAAAAGTGCGGGAGGATCTTTATTTCCAAAACTACATGAATGATCCAGATGCTCCTGGTGGAACACCTGTCATGCAGCAGTCCCAGAAGGACAAACCTCTTAAGCGTAGGTCAGGTCTGGAAGGTCGATTGAGAGATGACCGTGGCAATAGACGAGACCATGATAGAGTAAATGATGGAGATAGGACTGACAACTCGCCATCCCATGAAAGGCAGTCCAAAGCACTGGAGATGGGAAATCATGATGAAGCAATGTATGATTATGCAGGGCCTGGTGTTCCTCCATTTACCTCAGATATGCCCCCACCTCCACCAGTGTTGATGCCTGTACCAGGAGCTGGGCCTTTGGGACCCTTTGTTCCCGCTCCACCAGAAGTTGCTATGCAGATGTTAAGAGAGCAAGGAGGGCCATCTTCATATGATGGCTCTGGGAGGAAGATGCGATCTGGCCCTCTTATGGGTGGACCAGCACCAATAATTGCTGTTCCCCCAGCTTTTAGACCAGATCCTCGACGGATGCGAAGTTATCAAGATCTGGATGCACCAGAAGATGAAGTCACTGTGATAGACTATCGCAGTTTGTA 2192 0.4617 MAEVMNMPSDSLDKSPSASAPPPQAAPVAADEDLPPPPPSSHPPPHSSSRRRDRDSRDRRDDRDFDRHPNRRGGGDYFDRNMSPLPPARERDRDHKRRRSPSPSYRDRRYSPQRRSPPAFKRSRRGSPRGGYGPDDRFGYDYFGGYDRGVGGRPGYTDEKYGRFAHRSAGGYQNGLSDLESNRGYADLPGGGTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYITTQKRAYFNAHKDEEWLRDKYHPTNLVSVIERRNENARRLAKDFLLDLQSGTLDLNPGLNASSSSKSGQASEPNSEEEADAGSKRRRHGREPNKENDFSAAPKAHPISSEPRRIQADIEQVQALLRKLDAEKGIEDNVLSSSDHKNDDKNHSGSVGPIIIIRGLTSVKGLEGAELLDTLITYLWRIHGVDYYGMIETSEAKGFRHVRPEGTGHDETSKLGSEWEKKLDSFWQGRLSGQDPLEVMTAKDKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPDVVVELTSKVREDLYFQNYMNDPDAPGGTPVMQQSQKDKPLKRRSGLEGRLRDDRGNRRDHDRVNDGDRTDNSPSHERQSKALEMGNHDEAMYDYAGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDGSGRKMRSGPLMGGPAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01523 730 MobiDBLite consensus disorder prediction 85 114 - -
Bva09g01523 730 MobiDBLite consensus disorder prediction 1 138 - -
Bva09g01523 730 Pfam Arsenite-resistance protein 2 444 581 IPR007042 -
Bva09g01523 730 MobiDBLite consensus disorder prediction 284 343 - -
Bva09g01523 730 MobiDBLite consensus disorder prediction 547 609 - -
Bva09g01523 730 MobiDBLite consensus disorder prediction 306 327 - -
Bva09g01523 730 MobiDBLite consensus disorder prediction 671 715 - -
Bva09g01523 730 ProSitePatterns Zinc finger C2H2 type domain signature. 505 528 IPR013087 -
Bva09g01523 730 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 730 - -
Bva09g01523 730 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 730 IPR039727 GO:0006397
Bva09g01523 730 MobiDBLite consensus disorder prediction 46 75 - -
Bva09g01523 730 Pfam SERRATE/Ars2, N-terminal domain 202 284 IPR021933 -
Bva09g01523 730 MobiDBLite consensus disorder prediction 566 609 - -
Bva09g01523 730 MobiDBLite consensus disorder prediction 284 305 - -
Bva09g01523 730 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01523 Bva-Chr9 8841889 8848814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01523 69 730 C2H2 Transcription Factor Family AT2G27100 63.650 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01523 - - gmx:100817569 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01037 07 12022854 12030948 Bva09g01523 09 8841889 8848814 ECH
Bva09g01523 09 8841889 8848814 Bva09g01523 09 8841889 8848814 ECH