Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01522 ATGGGGCAAGAAACCAGAAAGCTCTCAGATGAGTATGAAGTCTCAGAGATCTTAGGGAGAGGAGGATTTTCTGTGGTGAGAAAAGGAACAAGCAAATCAAGAAGTGGGAAGAAAACCCATGTGGCCATTAAAACTCTGAGAAGGTTAGGACCCTCAAGTGCTAATAATCCTTCTGTTCATGGTGGCAACAAGAGCATGGGGTTCCCTCTTTGGAGGCAAGTTTCAGTATCAGATGCTTTGTTAACCAATGAGATTCTTGTTATGAGGAAGATAGTTGAAAAAGTTTCGCCCCATCCAAATGTTCTTGAACTTTATGATGTGTGTGAGGACTCAAATGGGGTTCATCTTGTGTTGGAGCTTTGTTCTGGGGGTGAGCTTTTTGATCGGATTGCAGCCATAGAGAGCTACACCGAGGAGAGGGCCGCGGCCGTGGTGAGGCAGATTGCAGAGGGATTGGATGCCATTCATAGAGCTAATATTGTCCATAGAGACTTGAAGCCTGAGAATTGCTTGTTTCTTGATAGCAGGGAGGATGCCCCTCTTAAGATCATGGACTTTGGTTTGAGTTCTGTGGAAGAATTTACTGATCCTGTTGTGGGTTTGTTTGGATCCATTGATTATGTTTCACCAGAGGCTCTTTCTCAGGGAAAGATAACAACAAAGAGTGACATGTGGTCTTTGGGTGTCATTCTATATATCTTACTTTCTGGGTATCCACCTTTCATTGCTCAGAATAATCGCCAAAAGCAGCAAATGATTATGACTGGGAATTTCAGTTTCTATGAGAAAACTTGGAAGAAAATTTCCTCACCAGCCAAACAACTGATTTCAAGTCTCCTAGCTGTGGATCCTAACAAGAGACCTAGTGCTCAAGAGCTTCTGTGTCATCCATGGGTGAGAGGTGACATAGCCAAAGATGATCAGATGGACCCTGAGATTGTCTCAAGACTGCAGAGTTTCAATGCTAGGCGCAAACTCCGAGCCGCTGCAATTGCCAGTGTATGGAGCACAACAATGTTCTTGAGAACCAGAAAATTGAAATCCTTGTTAGGGTCCCATGATCtctcaaaagaagaaattgaaaacctCAGAGTGCATTTCAAGAAGATATGTGCTAATGGAGACAATGCCACTCTCTCTGAATTTGAGGAGGTGCTTAAGGCAATGAATATGTCTTCACTGGTACCTCTAGCAGCTCGTATATTTGACCTATTTGACAACAACCGTGATGGAACCGTTGACATGAGAGAGATTCTCTGTGGCTTCTCTAGCCTCAAGAACTCAAAAGGTGACGATGCTCTCCGTTTGTGCTTCCAGATGTATGACACAGATCGATCCGGTTGCATCACTAAGGAAGAAGTAGCATCTATGCTAAGAGCCTTACCAGAAGATTGCCTTCCTGTTGATATCACTGAACCTGGTAAACTGGATGAGATATTTGACCTAATGGATGCAAACAGTGATGGAAAAGTTACTTTTGAGGAGTTCAAAGCTGCCATGCAAAGGGATAGCTCTCTGCAAGATGTAGTTCTCTCCTCTCTTAGGCCATCATA 1553 0.4308 MGQETRKLSDEYEVSEILGRGGFSVVRKGTSKSRSGKKTHVAIKTLRRLGPSSANNPSVHGGNKSMGFPLWRQVSVSDALLTNEILVMRKIVEKVSPHPNVLELYDVCEDSNGVHLVLELCSGGELFDRIAAIESYTEERAAAVVRQIAEGLDAIHRANIVHRDLKPENCLFLDSREDAPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQNNRQKQQMIMTGNFSFYEKTWKKISSPAKQLISSLLAVDPNKRPSAQELLCHPWVRGDIAKDDQMDPEIVSRLQSFNARRKLRAAAIASVWSTTMFLRTRKLKSLLGSHDLSKEEIENLRVHFKKICANGDNATLSEFEEVLKAMNMSSLVPLAARIFDLFDNNRDGTVDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEDCLPVDITEPGKLDEIFDLMDANSDGKVTFEEFKAAMQRDSSLQDVVLSSLRPS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01522 517 ProSiteProfiles Protein kinase domain profile. 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01522 517 CDD EFh 434 501 IPR002048 GO:0005509
Bva09g01522 517 CDD EFh 363 423 IPR002048 GO:0005509
Bva09g01522 517 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Bva09g01522 517 SUPERFAMILY EF-hand 345 507 IPR011992 -
Bva09g01522 517 Gene3D Phosphorylase Kinase; domain 1 3 68 - -
Bva09g01522 517 PRINTS Recoverin family signature 355 374 - -
Bva09g01522 517 PRINTS Recoverin family signature 401 422 - -
Bva09g01522 517 PRINTS Recoverin family signature 491 511 - -
Bva09g01522 517 PRINTS Recoverin family signature 425 444 - -
Bva09g01522 517 ProSiteProfiles EF-hand calcium-binding domain profile. 393 428 IPR002048 GO:0005509
Bva09g01522 517 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Bva09g01522 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Bva09g01522 517 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 12 501 - -
Bva09g01522 517 Gene3D Phosphorylase Kinase; domain 1 69 126 - -
Bva09g01522 517 SMART serkin_6 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01522 517 SMART efh_1 397 425 IPR002048 GO:0005509
Bva09g01522 517 SMART efh_1 433 461 IPR002048 GO:0005509
Bva09g01522 517 SMART efh_1 475 503 IPR002048 GO:0005509
Bva09g01522 517 Gene3D - 343 510 - -
Bva09g01522 517 ProSitePatterns EF-hand calcium-binding domain. 406 418 IPR018247 -
Bva09g01522 517 ProSitePatterns Protein kinases ATP-binding region signature. 18 44 IPR017441 GO:0005524
Bva09g01522 517 Pfam EF hand 401 417 IPR002048 GO:0005509
Bva09g01522 517 Pfam Protein kinase domain 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01522 517 SUPERFAMILY Protein kinase-like (PK-like) 5 322 IPR011009 -
Bva09g01522 517 CDD STKc_CAMK 12 298 - -
Bva09g01522 517 CDD EFh 400 459 IPR002048 GO:0005509
Bva09g01522 517 Pfam EF-hand domain pair 432 501 IPR002048 GO:0005509
Bva09g01522 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 501 - -
Bva09g01522 517 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Bva09g01522 517 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
Bva09g01522 517 Gene3D Transferase(Phosphotransferase) domain 1 127 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01522 Bva-Chr9 8836608 8837321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01522 80 504 EF-hand Containing Proteins AT3G10660 37.071 4.60e-78 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Bva09g01522 Pkinase 1.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01522 K13412 - gmx:732616 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01522 09 8836608 8837321 Bva09g01522 09 8836608 8837321 ECH