Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01516 ATGTCACCCCCACCACTTTCCCTCTTTCCCTTCCTTTGCTTCCTCTTGCTCTTTCTCCCATTATTGCTAGCCCAAGCTCCGCCACCACAAGCCCCGCCACCGCGAAACATATCTTCGTCTTCTCCTCCACCGTCTTCCTCTGCAGCCTGTAAGTCTACATTATACCCTAAACTATGCCGTTCCATTCTCTCCACCATACGATCCTCGCCATCGGATCCCTATGGCTACGGGAAGTTTTCTGTCAAGCAGAGCCTCAAACAAGCCAGGAAACTGGCCAAAGTGTTTGAGGACTTCATTAAACGGCAccgttcttcttcttcacttaACCAAGCTGAGATTGCGGCGTTGGATGACTGCCGGGAGCTAAACCAGCTCAATATGGATTACTTGGAGTCTGTGTCGGAGGAGCTGAAATCCACCGCCGGCCAGCAGCAAGAGCTGGTGGAGAAAATAGAGACTTACCTGAGCGCCGTCGCAACCAACCATTACACTTGCTATGATGGGTTGGTGATGACCAAGAGCAATATTGCCAATGCCTTAGCATTGCCATTGAGGAGCTTGACCGAGTTGTATAGTGTTTCACTTGGTTTGGTCGCTGATGCTGTGAATCGGAAACTAAGAAAAAGCAAGACCCGCAAACATGGTCTTCCAACAAAAACCTACAAAGTGAAGCGGCCATTGGAGAAGCTCATTAAGCTTCTTAGAAAGAAGCATAGTACTTGTGAACAATCATCCAATTGCACTAGGAGTAACGAAAGGCTTCTTGAAGAAGAAAGCACAAGCAAAGGGATTCTATTGAACAACTACACCATTGTGAGCCCTTATGGCACAGACGACTTCACTTCCATTGGAGAAGCCATTGCTGCTGCACCCAACAACTCAAAACCAGAAGATGGCTATTTCCTCATCTATGCCAGAGAAGCAGTGTACGAGGAGTATGTCATTGTTCCCaaacagaagaagaatatcGTGCTCATTGGAGATGGTATCAATAAGACAATCATCACAGGGAACCACAGTGTGATGGATAATTTTACAACTTTCAATTCTTCTACTTTTGCTGTTGCTGGAGAAAGATTTATAGCAATTGATATTACATTCAGAAACACAGCTGGACCACAAAAACACCAAGCAGTAGCTGTGAGGAACAATGCAGATCTCTCCACCTTCTACCGTTGCAGTTTTGAAGGATACCAAGACACTCTATATGTCCATTCTCTGAGACAATTCTACAGAGAATGTGACATCTATGGCACTGTGGATTTCATCTTTGGCAATGCAGCTGTTGTTTTCCAAAGCTGCAACATTTTCGCCCGAAAACCATTACCATTTCAGAAGAATGCCGTGACAGCACAAGGTAGAACAGACCCTAATCAGAACACCGGCATTTCGATCCAAAACTGCACCATTCAAGCAGCACCAGACTTGGCAATGGACTTGAACTCAACCTTGAATTACTTGGGAAGGCCATGGAAGGAGTACTCGAGGACCGTCTATATGGAGTCCTATATTGGTGATCTGATTCAACCAGCAGGATGGTTAGAATGGAATGGCACATTTGGGTTGGATACCCTTTTCTATGGTGAGTTCAAGAATCATGGACCTGGTGCAAAGACTGATCAGAGAGTGAAATGGCATGGTTATAGTCTGTTGAATGTTACTCAAGCTTTTAACTTTACTGTGCTTAATTTTACACTGGGAAAGACATGGCTGCCAGACACAGATATACCCTTCAATGAAggattaatatatta 1754 0.4401 MSPPPLSLFPFLCFLLLFLPLLLAQAPPPQAPPPRNISSSSPPPSSSAACKSTLYPKLCRSILSTIRSSPSDPYGYGKFSVKQSLKQARKLAKVFEDFIKRHRSSSSLNQAEIAALDDCRELNQLNMDYLESVSEELKSTAGQQQELVEKIETYLSAVATNHYTCYDGLVMTKSNIANALALPLRSLTELYSVSLGLVADAVNRKLRKSKTRKHGLPTKTYKVKRPLEKLIKLLRKKHSTCEQSSNCTRSNERLLEEESTSKGILLNNYTIVSPYGTDDFTSIGEAIAAAPNNSKPEDGYFLIYAREAVYEEYVIVPKQKKNIVLIGDGINKTIITGNHSVMDNFTTFNSSTFAVAGERFIAIDITFRNTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIFARKPLPFQKNAVTAQGRTDPNQNTGISIQNCTIQAAPDLAMDLNSTLNYLGRPWKEYSRTVYMESYIGDLIQPAGWLEWNGTFGLDTLFYGEFKNHGPGAKTDQRVKWHGYSLLNVTQAFNFTVLNFTLGKTWLPDTDIPFNEGLIY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01516 584 Gene3D - 268 584 IPR012334 -
Bva09g01516 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 198 IPR035513 -
Bva09g01516 584 PANTHER PECTINESTERASE 10 582 - -
Bva09g01516 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 192 IPR006501 GO:0004857
Bva09g01516 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 200 IPR035513 -
Bva09g01516 584 SMART PMEI_2 41 197 IPR006501 GO:0004857
Bva09g01516 584 CDD PMEI-like_3 48 199 - -
Bva09g01516 584 Pfam Pectinesterase 271 567 IPR000070 GO:0030599|GO:0042545
Bva09g01516 584 Pfam Plant invertase/pectin methylesterase inhibitor 48 196 IPR006501 GO:0004857
Bva09g01516 584 MobiDBLite consensus disorder prediction 29 49 - -
Bva09g01516 584 PANTHER PECTINESTERASE 10 582 - -
Bva09g01516 584 ProSitePatterns Pectinesterase signature 2. 416 425 IPR033131 -
Bva09g01516 584 SUPERFAMILY Pectin lyase-like 267 581 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01516 Bva-Chr9 8787593 8792980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01516 49 583 Carbohydrate Esterase AT3G10720 62.407 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01516 K01051 - gmx:100816503 889.797