Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01515 ATGTATTCCTTCAAATCCTATggcaaagttgacgaagccgaGCAATCGAGGCTTAAAGCACAGCGAAAGAGGATCATAATCATAACCTTATCCTCCATAATCCTTGTCGGTGTTGTTCTTGCTGCTGTACTTGGAACCAATGCTCGTAATAATTCTCAAGACGACTCGAAAGAGGGCAATGGTGATGCCCTTTCGGCTGCAGTTAAAGCCATTTGCAATGTGACATTGTACAAGGAATCATGCTACAGAAGCCTTGGCCCTCTTGTTCAATCTGGGCAGATTCAGCCTGAGGAGCTGGTCAAGTTGTCAATTAATGTGGCTTTGGCTGAAGTGTCCAAAGCAGCTCAAGGTTTCTCCGAGAATGGAGTTTTCAAAGGGGTGACGGATAATAGGACCAAAGAGGCTTTGAGAAATTGTGGGGAGCTCCTGGGTCTTGCAGTTGATCATCTCAATAGCTCATTGTCTTCTGCGGAAGTTTCTTCCCTCCTTGATGTTTTTGATGATTTACAAACGTGGTTGAGTGCTGCAGGCACTTACCAGCAAACATGCATTGATGGCTTGGAGgaagtgaaaaaagaattgaagaataCTGCCATGAATCATCTTAAAAACTCCAGTGAGTTTACCAGTAACAGCCTTGCCATCATTTCTTCCATTAGCAACGCGGCGAGCTCGTTGAACCTAAGGCGCTTACTGAGCTTACCTCATCATAACAATGAAGCACCAAAGTGGCTTCATTCAGAAGACCACAGGTTACTTAGAGATCAGCATTTGAGGATCAAAGCTGATATCATTGTGGCAAAAGATGGGACTGGAAAATATAGAACAGTCACTGATGCACTAAAGCATGTACCTGAGAAGAGTAACAAGAGGACTGTGATCTATGTGAAGAAAGGGGTTTACTATGAAAATGTGAGAGTGGAGAAGACCAAATGGAATGTGATGATCATTGGTGATGGCATGACCAATACAATTGTCTCTGGAAGGCTTAACTTTGTTGATGGCACCCCAACATTTTCAACTGCAACTTTTGCTGTGTTTGGACGGAATTTAATAGCTAGGGATATGGGCTTTCGCAACACAGCTGGTCCACAAAAGCACCAGGCAGTGGCACTAATGACAAGTGCAGATCAAGCAGTTTACTACCGTTGCCACATTGATGCATTCCAAGACACTCTCTATGCTCACAGCAACCGCCAATTCTACCGCGAATGCAATATCTACGGCACAGTTGATTTCATCTTTGGCAACTCAGCAGTTGTCATCCAAAACTGCAACATCATGCCCAAAATGCCCATGCAGGGCCAGCAGAACACAATCACAGCACAGGGCAAAATTGACCATCATCAGAACACAAGGATTTCAATTCAGAATTGCAACATTGCACCCTCAGGGAACTTGAGTTCTGTCAGAACATACCTTGGGAGGCCGTGGAAGAAGTTTTCGACGACGGTGTTCATGCAATCCACCATGGATGAATTTATTCACCCAGATGGTTGGTTGCCATGGGTGGGAAACTCAGCACCAgatactatattttatgcagaGTTTCAGAATGTTGGAGCTGGTGCTGCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAGAACCATTTCTGCTAGGCAAGCCAATAGATTTACTGTTAGGACATTTCTTCAAGGAGATAGATGGATTACGGCTTCAGGTGTGCCCTATAATTA 1700 0.4288 MYSFKSYGKVDEAEQSRLKAQRKRIIIITLSSIILVGVVLAAVLGTNARNNSQDDSKEGNGDALSAAVKAICNVTLYKESCYRSLGPLVQSGQIQPEELVKLSINVALAEVSKAAQGFSENGVFKGVTDNRTKEALRNCGELLGLAVDHLNSSLSSAEVSSLLDVFDDLQTWLSAAGTYQQTCIDGLEEVKKELKNTAMNHLKNSSEFTSNSLAIISSISNAASSLNLRRLLSLPHHNNEAPKWLHSEDHRLLRDQHLRIKADIIVAKDGTGKYRTVTDALKHVPEKSNKRTVIYVKKGVYYENVRVEKTKWNVMIIGDGMTNTIVSGRLNFVDGTPTFSTATFAVFGRNLIARDMGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIMPKMPMQGQQNTITAQGKIDHHQNTRISIQNCNIAPSGNLSSVRTYLGRPWKKFSTTVFMQSTMDEFIHPDGWLPWVGNSAPDTIFYAEFQNVGAGAATKNRVKWKGLRTISARQANRFTVRTFLQGDRWITASGVPYN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01515 566 SMART PMEI_2 63 215 IPR006501 GO:0004857
Bva09g01515 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 219 IPR035513 -
Bva09g01515 566 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Bva09g01515 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 221 IPR035513 -
Bva09g01515 566 PANTHER PECTINESTERASE 11 565 - -
Bva09g01515 566 Pfam Pectinesterase 263 555 IPR000070 GO:0030599|GO:0042545
Bva09g01515 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 218 IPR006501 GO:0004857
Bva09g01515 566 PANTHER PECTINESTERASE 11 565 - -
Bva09g01515 566 Coils Coil 184 204 - -
Bva09g01515 566 CDD PMEI-like_3 70 213 - -
Bva09g01515 566 Pfam Plant invertase/pectin methylesterase inhibitor 67 215 IPR006501 GO:0004857
Bva09g01515 566 Gene3D - 257 566 IPR012334 -
Bva09g01515 566 SUPERFAMILY Pectin lyase-like 260 565 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01515 Bva-Chr9 8783578 8786630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01515 6 566 Carbohydrate Esterase AT5G04960 57.042 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01515 - - gmx:100808802 790.415