Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01500 ATGCCCATAGCAATGTCCATTATTACAAGACCCATGTttatctctcttctcttctttgtgGTATGCTtcattaaacaaaacataacTCTAGCAGAGTCAAATAATTACTACCACTTTTGTGACAATACCACCAAGCTCGCCTCCGCTGATAACCCCCTTTATCAATCCAACCTCAACGACCTTTTGTTGAAGCTCTTGTCCAATGCAAACAATGACGGCCAAGGGTTTTGGAACACCACCGTAGGGAACACCACCACAACCACCGTGTACGGCAGCTATCTCTGCCGTGACGACATTAGCTCCATCTTCTGTCATTACTGCGTTTACAGTGCCAGACAAGAGATATTGCAGCGATGTCCGAACAACACGGCAGCAATCATATGGTACGAGGATTGCATGCTTCGTTACTCGAATGAGGATTTCTTTGGAATTGTTAGAGCAGCTCCATTTTGGTATGTCTACGGTATTAACCGTACTGGTGATTCGAGAAAAGTTGAGAATGCTGACGATTTCACAAATAGATTGGTTACAGATGCGACAATGGACAAATCAACAACATTGTTTGCAGCAAATGAATATAATGTCAGTGACACAGAGAAATGGTATGGATTGGTGCAATGCAGTAGAGATATTAATAGTTCTAGTTGCCGAAATTGTTTGGAATCGTTGTTAAATAGAAGGCCAGAACCTAGGGATAGAATGGGCATGAGGCTATTGGCTCCAAATTGTTTGGTTATGAGAGACAACTACCTTTTCTTCAATCTTGATAACTTACCAATAACACCTGGTGCCAGTCCTGTTCCGAGTCCTGTTTCCAGCCCTGTAATTCCCAATCCCAACCCAgAGAGCAAGAAAGGTGCTAGCAAGGCAATAATTctggtaattataattgtagCAGTAACATTAGCAGCAGCTCTATCAGCTTGCTGTTACTGCTTATGGTGCAGGAATAACACAGATGGGCAAGAAGGTACCAGTGACCTTGTTCTTAATGACCATCCTCAACTTGAAGATTCATTGAAGGCAGACCTTCCTATCATGCCTTTCAGTATCATCAAGCACTGCACAAATCACTTCTCAGATGAATCAAAGTTAGGGAGAGGGGGATTTGGTTCTGTTTATAAGGGTGTCTTACCAAACGGAAAGCATGTGGCGATTAAAAGGCTCTCCAGAACATCTCATCAAGGTTTAGAAGAGTTTAGAAATGAAGTAATCTTCATTGCAAAATTGCAACACAGAAATCTTGTAAGACTGTTGGGTTGCTGCATGGAGGAAAATGAGAAGGTGCTCGTGTATGAGTACATGCCCAATTCTAGCCTCGACTATCATCTCTTTGATGAATCAAAACGCAAACAACTAGATTGGAAATTGCGGCTAAATATCATCAAAGGAATTGCAAAAGGTCTTTGTTATCTTCATGAAGAGTCTCGTCTCAGATTGATTCATAGAGATCTCAAGCCTAGTAATATTTTGTTGGATGAAAAGATGAATCCAAAGATATCAGACTTTGGCTTGGCAAGAGTTTTCGGAATAgaccaagaagaagaaaatactcGAAGAATAGTTGGAACATATGGATATATGGCTCCTGAATATGCTATGGAAGGAATTTTTTCAGTAAAATCTGATGTTTATAGCTTTGGAGTTcttatattagaaattattaatggaagaaagaatgGTGGATTTCATCTTCAAGAGCCTGGTCAAACTCTTCTTAAATATGCATGGAGATTATGGAATGAGGGAAGGGTACTAATGTTGATGGATCCATTAATAGAAACTTCATGCACACCAAATGAAGTTGCAAAATGCATACATATTGGTTTGTTATGTGTTCAAGATGATGCAGCAGATCGACCCACCATGCCAAATATTGCTTCCATGCTGTCAAATGACAAGGTAAACCTTCCAAACCCTAAGGAACCTGCATTTTCTGTGGGCAGAGCAGCTGTGGAACAAGAACAGTTGACAGAAACATCCAAAAATTGTTCAGCCAATGAAGTAACAATTTCTGATATTGGACCTAGGTG 2033 0.3861 MPIAMSIITRPMFISLLFFVVCFIKQNITLAESNNYYHFCDNTTKLASADNPLYQSNLNDLLLKLLSNANNDGQGFWNTTVGNTTTTTVYGSYLCRDDISSIFCHYCVYSARQEILQRCPNNTAAIIWYEDCMLRYSNEDFFGIVRAAPFWYVYGINRTGDSRKVENADDFTNRLVTDATMDKSTTLFAANEYNVSDTEKWYGLVQCSRDINSSSCRNCLESLLNRRPEPRDRMGMRLLAPNCLVMRDNYLFFNLDNLPITPGASPVPSPVSSPVIPNPNPESKKGASKAIILVIIIVAVTLAAALSACCYCLWCRNNTDGQEGTSDLVLNDHPQLEDSLKADLPIMPFSIIKHCTNHFSDESKLGRGGFGSVYKGVLPNGKHVAIKRLSRTSHQGLEEFRNEVIFIAKLQHRNLVRLLGCCMEENEKVLVYEYMPNSSLDYHLFDESKRKQLDWKLRLNIIKGIAKGLCYLHEESRLRLIHRDLKPSNILLDEKMNPKISDFGLARVFGIDQEEENTRRIVGTYGYMAPEYAMEGIFSVKSDVYSFGVLILEIINGRKNGGFHLQEPGQTLLKYAWRLWNEGRVLMLMDPLIETSCTPNEVAKCIHIGLLCVQDDAADRPTMPNIASMLSNDKVNLPNPKEPAFSVGRAAVEQEQLTETSKNCSANEVTISDIGPR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01500 677 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Bva09g01500 677 Gene3D - 155 252 IPR038408 -
Bva09g01500 677 Gene3D - 32 141 IPR038408 -
Bva09g01500 677 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 674 - -
Bva09g01500 677 Gene3D Phosphorylase Kinase; domain 1 327 434 - -
Bva09g01500 677 PANTHER PROTEIN KINASE DOMAIN 34 674 - -
Bva09g01500 677 ProSiteProfiles Gnk2-homologous domain profile. 34 141 IPR002902 -
Bva09g01500 677 ProSiteProfiles Protein kinase domain profile. 359 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01500 677 Pfam Protein tyrosine and serine/threonine kinase 362 629 IPR001245 GO:0004672|GO:0006468
Bva09g01500 677 SMART serkin_6 359 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01500 677 Pfam Domain of unknown function (DUF3403) 633 677 IPR021820 GO:0004674
Bva09g01500 677 Gene3D Transferase(Phosphotransferase) domain 1 435 642 - -
Bva09g01500 677 ProSiteProfiles Gnk2-homologous domain profile. 146 252 IPR002902 -
Bva09g01500 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Bva09g01500 677 Pfam Salt stress response/antifungal 167 246 IPR002902 -
Bva09g01500 677 Pfam Salt stress response/antifungal 40 138 IPR002902 -
Bva09g01500 677 CDD STKc_IRAK 365 630 - -
Bva09g01500 677 SUPERFAMILY Protein kinase-like (PK-like) 344 649 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01500 Bva-Chr9 8597447 8601136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01500 17 645 Receptor kinase-like Gene Family AT4G05200 43.994 9.63e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01500 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01500 - - gmx:100796972 626.706