Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01499 ATGGAAAGTGAGATTGAAGATGGGTTGCTACTCAAGGACCAGAATGGATCAAAGTTGGATGATGAGGGTAATGGAGTAAGTTCAGGTGGAGTTATTCTGAAAAAAGGGCCCTGGACATCTGCTGAAGATGCTATTTTGGTGGACTATGTCAAGAAGCACGGGGAGGGGAACTGGAATGCTGTTCAGAAACACTCAGGCCTATCCCGTTGTGGCAAAAGCTGTCGACTACGGTGGGCAAATCACCTGCGGCCAAATTTAAAGAAAGGGGCATTTACTGCAGAAGAAGAGCGGTTGATTGCTGAACTACACGCCAAGATGGGAAACAAATGGGCACGCATGGCGGCACATTTGCCCGGTCGTACAGATAATGAGATAAAGAACTACTGGAATACCCGGATAAAGAGGCGTCAACGGGCTGGCTTGCCACTTTACCCTCCTGAAGTGTCTTTGCAAGCATTGCAAGAGAGTCAGCACGCCCAGAGCACTGCAGGAATTAATGATGGTGATAGAGGAGATCATGGTTTCCAGCAGAAAAATAGTTATGAGATACATGATACAATATTTGATAGTTTGAAGGCTAACCTGGGAATTTTACCTTACATACCAGAGCTTCCTAATCTTTCTGCTGATAGCATTCTGCTGAAGGGTCTTGGTTCTTCCCACTACTGTAACTTTGTGCCATCAACATTGCCTCACCATAAACGTCTTCAAGAGTCAACAATGCCATTTCTTGGTTCCAATGTTGTGAACAGAAATGGGTATTATCCATTTGACCAAATTCACAATAATGCCTCAAATAAGATTGCTCGATCATTTGGAATGCATTCTCCTCTTGATCCTGGTCCCTCCTCACAGAATTCACTATCTTACGGCCATTCACTTTCAAATGGCTACTCCTCTACTTCTAAGCCAACTTCTGAGGCTTTGAAGATGGAGCTCCCTTCACTCCAATATCCAGAAACTGACCTTGGTAGCTGGGGCACATCACCTCCCCCGCCTCCTTTAACTGAGTCAGTTGATGTTTTCATTCAGTCTCCGCCAAATAGTGCACTAGAGTCAGATAGCTCCTCACCACAGAATACTGGCCTCCTTGATGACATGCTTCATCAGGCAAAAACTATAAGCAGTTCAAAGAATCATTGTTCTGACAAGAGTTCAAATTCTTCCACTGCAACTCCTGGTGAGGGAGCTGACAGTTCCACTTTTAACATGCGTGAGACGGAATGGGAAGACTATGCTGATCATGTTTCTCCATTTGGTGCAACTTCAATGTTAAACGAATACCCTGCTATTAGTGCCAATGGAAATTCATTGGATGAACAACTACCAGCTCAAGTCTTTAGTGGCAACGTTGTGAAACATGAACCTGGTGAGCAGGCTTGGACCCCTAACAGTGAAAATCAAACCATGTCCATGTTGGATATCAGTCGGATAGACACATTGCTTGCTTCAGATTGGGCTGAGCAGAATTTAAGGAATAATCAGAACCAAACAATCAACACAGATGCCGTAGCAACCCTTCTCGGGGACGATTTAGCCACCGACTACAAGCAAATGTCTACAGCTGGAACTTCTGCATCAAGTCAAGTATGGGGACTCGGTTCGTGTTCATGGAATAACATGCCTGCTGTGTGTCAAATGCCTGATCTTCCTTG 1655 0.4483 MESEIEDGLLLKDQNGSKLDDEGNGVSSGGVILKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVSLQALQESQHAQSTAGINDGDRGDHGFQQKNSYEIHDTIFDSLKANLGILPYIPELPNLSADSILLKGLGSSHYCNFVPSTLPHHKRLQESTMPFLGSNVVNRNGYYPFDQIHNNASNKIARSFGMHSPLDPGPSSQNSLSYGHSLSNGYSSTSKPTSEALKMELPSLQYPETDLGSWGTSPPPPPLTESVDVFIQSPPNSALESDSSSPQNTGLLDDMLHQAKTISSSKNHCSDKSSNSSTATPGEGADSSTFNMRETEWEDYADHVSPFGATSMLNEYPAISANGNSLDEQLPAQVFSGNVVKHEPGEQAWTPNSENQTMSMLDISRIDTLLASDWAEQNLRNNQNQTINTDAVATLLGDDLATDYKQMSTAGTSASSQVWGLGSCSWNNMPAVCQMPDLP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01499 551 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Bva09g01499 551 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Bva09g01499 551 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Bva09g01499 551 Gene3D - 34 87 - -
Bva09g01499 551 SUPERFAMILY Homeodomain-like 34 129 IPR009057 -
Bva09g01499 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Bva09g01499 551 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 2 547 - -
Bva09g01499 551 MobiDBLite consensus disorder prediction 278 308 - -
Bva09g01499 551 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 2 547 - -
Bva09g01499 551 MobiDBLite consensus disorder prediction 374 401 - -
Bva09g01499 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Bva09g01499 551 MobiDBLite consensus disorder prediction 153 176 - -
Bva09g01499 551 MobiDBLite consensus disorder prediction 271 341 - -
Bva09g01499 551 SMART sant 34 84 IPR001005 -
Bva09g01499 551 SMART sant 87 135 IPR001005 -
Bva09g01499 551 Gene3D - 90 136 - -
Bva09g01499 551 CDD SANT 37 82 IPR001005 -
Bva09g01499 551 CDD SANT 90 131 IPR001005 -
Bva09g01499 551 ProSiteProfiles Myb-like domain profile. 33 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01499 Bva-Chr9 8585793 8591050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01499 20 551 MYB Transcription Factor Family AT5G06100 43.199 2.82e-128 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva09g01499 Myb_DNA-binding 5.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01499 K09422 - gmx:100810415 726.857