Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01485 ATGGAGCCAACAAAACTCATCACTCTCCTACTTCTTCTGAGCTTCAAATTCCTCAAAACGACACCACAATCCATAAACTACGTAGGAGATGATTGTCACaactcaagtttctccaccgAACAAACTCTTAATAACGCATACCAAACGAACCTTAACGATGTCCTCACATTGCTATCCTCCGACGCTGCCACCAGCAGAGGATACAACCACACCGCCGAAGGCACCGGCACCGGAGACGCCGTGTACGGCCTCTACGACTGCCGGGGCGACGTGGTTGGACGCTTTTGCCAGTTCTGTGTCTCAACTGCCACCAGAGAAATCCTCACGCGCTGCCCAAACCGTCTCTCTGCGGTTGTCTGGTACGATTTCTGCATTTTCCGGTACTCCAACAAAAACTTCTTCGGAAACCTCACCATAAGTCCTTCTTGGAACATTTCTGGGTCGAAAAACATATCGGGTCCCTCAGAACTTGAGAAAGCTTTGAGCTTTATGAGAAGGTTGATAAGAAAGGCAACTGTTGAGACTAACCAGCTTTTTGCCATGGATGAGTTTGATCTGAGTCCGGATAAGAAAAGATATGGGTTGGTGCAGTGTAGCAGAGACCTTACTAACGAAGAGTGTAGTCAGTGTTTGACTGCTATGGTAGATAAAGTTTCCCAGTGTTGTGGGACAAAACTGGGATGGCAAGTTTTGGCTCCTAGTTGTTTGATAAAGTATGCTGATTACATGTTCTATGATTTGAATACTCAGACAACTTCATCATCTCCGGTGTCTGATCGGAAAACAGGAGGTACTAGCAGCAGCAAGACAAGAACCTTGATCATTAGCATAATAAGCGCATTGGTTGCACTAGCTCTATTAAGTTGCTCCATCTACTACTTCCTCCGGCGGAAGAGAGTAAGAAAAGGGACTCTGCTATTAGAGACCACCCCAATAATTTTCCCTGGCAATGATCAGAACTCCTATGAAGACCTTCCTACTATCCCTTTCATTACAATTCAAGAGAGTACTAACAACTTCTCGAAAGAATCTAAATTGGGAGAAGGTGGCTTTGGTCCTGTTTACAAGGGAATTTTGCTAGATGGGAGGGAAGTTGAAGTAAAAAGGCTATCAAAAACTTCTGCGCAAGattttggATTGGCAAGGACATTTGAAAGGGACCAAAATCAAGCAAATACTAAAAGAGTAATGGGTACTTATGGATATATGGCTCCTGAATATGCTATGGAAggattattttctatgaagTCCGATGTTTTTAGCTTTGGAGTTCTCATGTTGGAGACCATTTGTGGGCAAAGAAATAGTGGATTTTATCTCTCAGAACACGGTCAGAGTCTTCTTGTATATACCTGGACACTATGGTGTGAAGGAAAATCACTGGAACTGATGGATCCAACTCTAGAAAAATCATACATAGCCGATGAAGTTACAAGGTGCATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCGGTGTTGTTGTCATGCTTGCAAGCGATACAATGACTCTTCCCCATCCCAACCACCCTGCATTTTCAGTCGGAAGAATGGCGCTCGGCGATTCTTCAACATTGAAAAATTCCAAGGATCCTTCTATTAATGATGTCACTGTGTCTCGTATTGCTCCAAGGTA 1658 0.4276 MEPTKLITLLLLLSFKFLKTTPQSINYVGDDCHNSSFSTEQTLNNAYQTNLNDVLTLLSSDAATSRGYNHTAEGTGTGDAVYGLYDCRGDVVGRFCQFCVSTATREILTRCPNRLSAVVWYDFCIFRYSNKNFFGNLTISPSWNISGSKNISGPSELEKALSFMRRLIRKATVETNQLFAMDEFDLSPDKKRYGLVQCSRDLTNEECSQCLTAMVDKVSQCCGTKLGWQVLAPSCLIKYADYMFYDLNTQTTSSSPVSDRKTGGTSSSKTRTLIISIISALVALALLSCSIYYFLRRKRVRKGTLLLETTPIIFPGNDQNSYEDLPTIPFITIQESTNNFSKESKLGEGGFGPVYKGILLDGREVEVKRLSKTSAQDFGLARTFERDQNQANTKRVMGTYGYMAPEYAMEGLFSMKSDVFSFGVLMLETICGQRNSGFYLSEHGQSLLVYTWTLWCEGKSLELMDPTLEKSYIADEVTRCIHIGLLCVQEDAADRPTMSGVVVMLASDTMTLPHPNHPAFSVGRMALGDSSTLKNSKDPSINDVTVSRIAPR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01485 552 Gene3D Transferase(Phosphotransferase) domain 1 358 513 - -
Bva09g01485 552 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 376 549 - -
Bva09g01485 552 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 15 376 - -
Bva09g01485 552 Gene3D - 142 244 IPR038408 -
Bva09g01485 552 Gene3D - 26 133 IPR038408 -
Bva09g01485 552 Pfam Domain of unknown function (DUF3403) 507 552 IPR021820 GO:0004674
Bva09g01485 552 ProSiteProfiles Protein kinase domain profile. 123 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01485 552 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 376 - -
Bva09g01485 552 Pfam Salt stress response/antifungal 163 242 IPR002902 -
Bva09g01485 552 Pfam Salt stress response/antifungal 32 130 IPR002902 -
Bva09g01485 552 SUPERFAMILY Protein kinase-like (PK-like) 325 534 IPR011009 -
Bva09g01485 552 Pfam Protein tyrosine and serine/threonine kinase 377 503 IPR001245 GO:0004672|GO:0006468
Bva09g01485 552 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Bva09g01485 552 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 376 549 - -
Bva09g01485 552 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01485 Bva-Chr9 8498587 8502974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01485 33 552 Receptor kinase-like Gene Family AT4G23280 35.017 5.84e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01485 PK_Tyr_Ser-Thr 9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01485 - - lja:Lj0g3v0351729.1 431.795