Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01482 ATGAAGCGAACAAAAATCATCACTTTCCTACTTCTTCTGAGCTTCAAATTCCTCCAAACAACACCACAATCCATAAACTACGTAGGAGATGATTGCCACAACTTAAGTTTCTCCTCCGAACAACCTCTTACTAATGCATACCGAACCAACCTTAACGATGTCCTCTCATTGCTATCCTCCGACGCTGCCACCAGCAGAGGATACAATCACACCGCAGAAGGCACTGGCGGAGATGCTGTTTTCGGCCTCTACGACTGCCGGGGCGACGTGGTGGGGCGCTTTTGCCAGTTCTGTGTCTCAACTGCTACCAGAGAAATTCTCACGCGCTGCCCAAACCGTCTCTCTGCTGTTGTCTGGTACGATTTCTGCATTTTCCGGTACTCCAACGAAAACTTCTTCGGAAACCTCACCCTAAGTCCTTCTTGGAACATTTCTGGGTCGAAAAACATATCGGGTCCCTTAGAACTTGAGAAAGCTTTGAGCTTTATGAGAAGTTTGATAAGAAAGGCAACTGTTGAGACTAACCAGCTGTTTGCCATGGATGAGCTTGATCTGAGTCCGAATAAGAAAAGATATGGGCTGGTGCAGTGTAGCAGAGACCTTACTAACGAAGAGTGTAGTCAGTGTTTGACTGCTATGGTAGATAAAGTTTCCCGGTGTTGTGGGACAAAACAGGGATGGCAGGTTTTGGCTCCTAGTTGTTTGATAAAGTACGATGATTTCATGTTCTATGACTTGAATACTCAGACAACTTCGTCATCTCCGGTGTCTGATCCGAAAACAGGAGGTACTAGCAGCAGCAAGACAAGAACCTTGATCATTAGCATAATAAGCGCATTGGTTGCACTAGCTCTATTAAGTTGCTCCATCAACTACTTCCTCCGGCGGAAGAGAGTAAGAAAAGGGATGCTGCTATTAGAGACCACCCCTATAATTTTCCCTGGCAATGATCAGAACTCCTATGAAGACCTTCCTACTATCCCTTTCATTACAATTCAAGAGAGTACTAACAACTTCTCCAAAGAATCTAAATTGGGAGAAGGTGGCTTTGGTCCTGTTTACAAGGGAATTTTGCCAGATGGGAGGGAAGTTGCAGTAAAAAGGCTATCAAAAACTTCTGGGCAAGGCTTAGAGGAGTTCAAAAATGAAGTTCTATTCATTGCTAAATTGCAACACAGAAACCTTGTGAGGCTCTTAGGTTGCTGCATTTATGAAGATGAAAAGCTACTTGTGTATGAGTACATGCCAAATTCTAGCCTTGACTCTTACCTTTTTGatATGGAAAAGCGAGAGCTGCTTGATTGGAAACTACGTGGATACATGGCTCCTGAATATGCTATGGAAGGACTATTTTCCGTAAAGTCTGatgtttttagttttggaGTTCTCATGTTAGAGACCATTTGTGGGCAAAGAAATGGTGGATTTTACCTCTCAGAACACGGTCAGAGTCTTCTTGTATACACCTGGACACTATGGTGTGAAGGAAAATCACTGGTACTGATGGATCcaattctagaaaaatcatacATTGCTGATGAAGTTACAAGGTGTATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCACTGTTGTTGTCATGCTCGCGAGCGAAACAATGACTCTTTCCCATCCCAACCACCCTGCATTTTCAGTTGGAAGAATGGCCCTAGGCGATTCTTCAACGTCGAAAAATTCCAAGGATCCTTCTATTAATGATGTAACTGTGTCTCATATTGCTCCAAGGTA 1772 0.4289 MKRTKIITFLLLLSFKFLQTTPQSINYVGDDCHNLSFSSEQPLTNAYRTNLNDVLSLLSSDAATSRGYNHTAEGTGGDAVFGLYDCRGDVVGRFCQFCVSTATREILTRCPNRLSAVVWYDFCIFRYSNENFFGNLTLSPSWNISGSKNISGPLELEKALSFMRSLIRKATVETNQLFAMDELDLSPNKKRYGLVQCSRDLTNEECSQCLTAMVDKVSRCCGTKQGWQVLAPSCLIKYDDFMFYDLNTQTTSSSPVSDPKTGGTSSSKTRTLIISIISALVALALLSCSINYFLRRKRVRKGMLLLETTPIIFPGNDQNSYEDLPTIPFITIQESTNNFSKESKLGEGGFGPVYKGILPDGREVAVKRLSKTSGQGLEEFKNEVLFIAKLQHRNLVRLLGCCIYEDEKLLVYEYMPNSSLDSYLFDMEKRELLDWKLRGYMAPEYAMEGLFSVKSDVFSFGVLMLETICGQRNGGFYLSEHGQSLLVYTWTLWCEGKSLVLMDPILEKSYIADEVTRCIHIGLLCVQEDAADRPTMSTVVVMLASETMTLSHPNHPAFSVGRMALGDSSTSKNSKDPSINDVTVSHIAPR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01482 590 Gene3D Phosphorylase Kinase; domain 1 315 414 - -
Bva09g01482 590 Gene3D Transferase(Phosphotransferase) domain 1 436 555 - -
Bva09g01482 590 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Bva09g01482 590 Pfam Salt stress response/antifungal 162 239 IPR002902 -
Bva09g01482 590 Pfam Salt stress response/antifungal 42 129 IPR002902 -
Bva09g01482 590 ProSiteProfiles Protein kinase domain profile. 339 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01482 590 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 439 587 - -
Bva09g01482 590 MobiDBLite consensus disorder prediction 565 581 - -
Bva09g01482 590 Pfam Domain of unknown function (DUF3403) 545 590 IPR021820 GO:0004674
Bva09g01482 590 MobiDBLite consensus disorder prediction 565 590 - -
Bva09g01482 590 Gene3D - 143 243 IPR038408 -
Bva09g01482 590 Gene3D - 26 132 IPR038408 -
Bva09g01482 590 Pfam Protein tyrosine and serine/threonine kinase 341 431 IPR001245 GO:0004672|GO:0006468
Bva09g01482 590 Pfam Protein tyrosine and serine/threonine kinase 440 541 IPR001245 GO:0004672|GO:0006468
Bva09g01482 590 SUPERFAMILY Protein kinase-like (PK-like) 321 565 IPR011009 -
Bva09g01482 590 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 16 438 - -
Bva09g01482 590 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 438 - -
Bva09g01482 590 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 439 587 - -
Bva09g01482 590 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01482 Bva-Chr9 8468999 8473480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01482 439 590 Receptor kinase-like Gene Family AT4G05200 41.975 4.80e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01482 PK_Tyr_Ser-Thr 5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01482 - - pvu:PHAVU_011G194300g 605.134