Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01478 ATGTTCTTTGTATCATTCGCAGCCAAAAAGGGAGGTAATAATCGGTCAACAATCTTGATCATTAGCATAATAAGTGCATTGGTTGGAATAGCTCTATTAAATTCCTCCATCTGCTACTTTCTGCTGCAGAAGAGAGTGAAAAAAGAGACGCTAGTGGGGACCACTCCCACAAATTTCCAAAGCAATATTCAAAGTGAGAACTCATATGAAGAACTTCCCATTGTCCcatttattacaattcaaGAGAgtaataaaaacttttcagAAGCATCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTACAAGGGAATTTTGCCAGATGGGAGGGAAATTGCAGTGAAAAGACTATCTAAAACTTCTGTACAAGGCTTGGAGGAGTTCAAAAATGAAGTAATATTCATAGCTAAATTGCAACACAGAAACCTTGTTAGACTTTTATGTTGCTGCATTCACGAAGACGAAAAGCTACTTGTGTACGAGTACATGCCAAATTCTAGTCTTGACTCTCACCTCTTTGACAAGGATAAAAGAAAGCTACTTGGTTGGAAGCTGCGACTAAGTAATCcaaaaatatcagattttggAATGGCAAGGACATTTGAAAGAGGCCAAAATCAAGCTAACACTAAAAGAATAATGGGAACTTATGGATATATGGCTCCTGAGTATGCTATGGAAGGattattttctacaaaatCTGATGTTTTCAGCTTCGGTGTTCTTATGCTGGAGATTATTTGTGGACAACGGAATAGTGGATTTTACCTCTCCAATCATGGTCAAAGTCTTCTTGTATATACATGGAAACTATGGTGTGAAGGAAAATCACTAGAACTGGTGGATCCAACTCTAGAAAAATCATACATAGGCCATGAAGTTGCAAGGTGCATACATATTGGTTTGTTATGTGTTCAAGAAGATGCAGCTGATAGACCAACCATGTCCGGTGTTGTTCTCATGCTGGGAAGTGATAAAGTGACTCTTCGCCGTCCCAACCGCCCTGCATTTTCAGTTGGAAGAATTGCCCTAGGAGAAGAATCTTCAATGAAAAGCCCCATGGATCCTTCTATTAATGACGTAACTGTTTCTAATATTAGTCCCAGGTA 1109 0.3742 MFFVSFAAKKGGNNRSTILIISIISALVGIALLNSSICYFLLQKRVKKETLVGTTPTNFQSNIQSENSYEELPIVPFITIQESNKNFSEASKLGEGGFGPVYKGILPDGREIAVKRLSKTSVQGLEEFKNEVIFIAKLQHRNLVRLLCCCIHEDEKLLVYEYMPNSSLDSHLFDKDKRKLLGWKLRLSNPKISDFGMARTFERGQNQANTKRIMGTYGYMAPEYAMEGLFSTKSDVFSFGVLMLEIICGQRNSGFYLSNHGQSLLVYTWKLWCEGKSLELVDPTLEKSYIGHEVARCIHIGLLCVQEDAADRPTMSGVVLMLGSDKVTLRRPNRPAFSVGRIALGEESSMKSPMDPSINDVTVSNISPR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01478 369 SUPERFAMILY Protein kinase-like (PK-like) 68 337 IPR011009 -
Bva09g01478 369 MobiDBLite consensus disorder prediction 352 369 - -
Bva09g01478 369 Pfam Domain of unknown function (DUF3403) 324 369 IPR021820 GO:0004674
Bva09g01478 369 MobiDBLite consensus disorder prediction 348 369 - -
Bva09g01478 369 Gene3D Transferase(Phosphotransferase) domain 1 172 332 - -
Bva09g01478 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 189 367 - -
Bva09g01478 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 188 - -
Bva09g01478 369 Gene3D Phosphorylase Kinase; domain 1 50 162 - -
Bva09g01478 369 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 189 367 - -
Bva09g01478 369 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 8 188 - -
Bva09g01478 369 Pfam Protein tyrosine and serine/threonine kinase 90 180 IPR001245 GO:0004672|GO:0006468
Bva09g01478 369 Pfam Protein tyrosine and serine/threonine kinase 191 319 IPR001245 GO:0004672|GO:0006468
Bva09g01478 369 ProSiteProfiles Protein kinase domain profile. 87 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01478 Bva-Chr9 8412496 8414355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01478 77 369 Receptor kinase-like Gene Family AT3G45860 47.917 8.44e-103 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01478 PK_Tyr_Ser-Thr 5.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01478 - - pvu:PHAVU_011G194300g 402.134