Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01475 ATGTTAGGGAAAGTTCCTCGTGTACAAAAGCTGGGATGGACGGTTGCAGTTCCAAGTTGTTTGGTAAAGTACCAGGAACTTTCTCCAGCAGCCAAAAAGGGAGGTAATAATCGGTCAACAATCTTGATCATTAGCATAATAAGTGCATTGGTTGGAATAGCTCTATTAAATTCCTCCATCTGCTACTTTCTGCTGCAGAAGAGAGTGAAAAAAGAGACGCTAGTGGGGACCACTCCCACAAATTTCCAAAGCAATATTCAAAGTGAGAACTCATATGAAGAACTTCCCATTGTCCcatttattacaattcaaGAGAgtaataaaaacttttcagAAGCATCTAAATTGGGAGAAGGTGGATTTGGTCCTGTTTACAAGGGAATTTTGCCAGATGGGAGGGAAATTGCAGTGAAAAGACTATCTAAAACTTCTGTACAAGGCTTGGAGGAGTTCAAAAATGAAGTAATATTCATAGCTAAATTGCAACACAGAAACCTTGTTAGACTTTTATGTTGCTGCATTCACGAAGACGAAAAGCTACTTGTGTACGAGTACATGCCAAATTCTAGTCTTGACTCTCACCTCTTTGACAAGGATAAAAGAAAGCTACTTGGTTGGAAGCTGCGACTAAGTAATCcaaaaatatcagattttggAATGGCAAGGACATTTGAAAGAGGCCAAAATCAAGCTAACACTAAAAGAATAATGGGAACTTATGGATATATGGCTCCTGAGTATGCTATGGAAGGattattttctacaaaatCTGATGTTTTCAGCTTCGGTGTTCTTATGCTGGAGATTATTTGTGGACAACGGAATAGTGGATTTTACCTCTCCAATCATGGTCAAAGTCTTCTTGTATATACATGGAAACTATGGTGTGAAGGAAAATCACTAGAACTGGTGGATCCAACTCTAGAAAAATCATACATAGGCCATGAAGTTGCAAGGTGCATACATATTGGTTTGTTATGTGTTCAAGAAGATGCAGCTGATAGACCAACCATGTCCGGTGTTGTTCTCATGCTGGGAAGTGATAAAGTGACTCTTCGCCGTCCCAACCGCCCTGCATTTTCAGTTGGAAGAATTGCCCTAGGAGAAGAATCTTCAATGAAAAGCCCCATGGATCCTTCTATTAATGACGTAACTGTTTCTAATATTAGTCCCAGGTA 1178 0.3812 MLGKVPRVQKLGWTVAVPSCLVKYQELSPAAKKGGNNRSTILIISIISALVGIALLNSSICYFLLQKRVKKETLVGTTPTNFQSNIQSENSYEELPIVPFITIQESNKNFSEASKLGEGGFGPVYKGILPDGREIAVKRLSKTSVQGLEEFKNEVIFIAKLQHRNLVRLLCCCIHEDEKLLVYEYMPNSSLDSHLFDKDKRKLLGWKLRLSNPKISDFGMARTFERGQNQANTKRIMGTYGYMAPEYAMEGLFSTKSDVFSFGVLMLEIICGQRNSGFYLSNHGQSLLVYTWKLWCEGKSLELVDPTLEKSYIGHEVARCIHIGLLCVQEDAADRPTMSGVVLMLGSDKVTLRRPNRPAFSVGRIALGEESSMKSPMDPSINDVTVSNISPR 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01475 392 Gene3D Phosphorylase Kinase; domain 1 73 185 - -
Bva09g01475 392 ProSiteProfiles Protein kinase domain profile. 110 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01475 392 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 2 211 - -
Bva09g01475 392 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 212 390 - -
Bva09g01475 392 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 211 - -
Bva09g01475 392 SUPERFAMILY Protein kinase-like (PK-like) 91 360 IPR011009 -
Bva09g01475 392 Gene3D Transferase(Phosphotransferase) domain 1 195 355 - -
Bva09g01475 392 MobiDBLite consensus disorder prediction 375 392 - -
Bva09g01475 392 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 212 390 - -
Bva09g01475 392 Pfam Protein tyrosine and serine/threonine kinase 113 203 IPR001245 GO:0004672|GO:0006468
Bva09g01475 392 Pfam Protein tyrosine and serine/threonine kinase 214 342 IPR001245 GO:0004672|GO:0006468
Bva09g01475 392 MobiDBLite consensus disorder prediction 371 392 - -
Bva09g01475 392 Pfam Domain of unknown function (DUF3403) 347 392 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01475 Bva-Chr9 8369138 8375714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01475 100 392 Receptor kinase-like Gene Family AT3G45860 47.917 1.66e-102 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01475 PK_Tyr_Ser-Thr 6.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01475 - - pvu:PHAVU_011G194300g 413.305