Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01468 atgcACCGCCAATTTCCCTTCACCATCACTTTCCTATTCTTGATTTCCTTATCTGCAGCTCAAAACACAGCACAAGACCAATCAGCACTAGATTATCGCTATGCTTGTCTAGACCAATCTTCAACTCCCCCATCAAGCACATACCAAGCCAACCTCAACAATCTCATCACCACCCTCTCATCTGATGCAGCCACCAGCAATGGTTTCGGCAACAGAACTTCCGGCACCGGTCAAAACACAGTCGTTTATGGCCTCTTCTTCTGCCGGGGAGACATAAACACGAGCTTCTGCCACTCTTGCGTGCAAAATATTAGCAGAATGATCATGCGGCACTGTCCCAACAATGCATCAGCTGTGTTATGGTACCCCTTTTGCCTTCTGAGGTACTCAAACCAGAATTTCTTCGCAAAACTCACCGTTTCGCCGAGGATTCCCATGTTTGATGCAACCCAGAACTTCACCAGTGCTGGAGAGTTTGACAGTGATGCGAGGATTTTGATGAATGGGTTGATACAGACCGCAGCCGAGACGCCGATGATGTTTGGGACACATATGTTTAACATAAACGGGACTCAGAGAAGGTACGGTTGGGTTCAGTGCAGCAGAGATATTACTAGTGAGGAATGCAGAACGTGTTTGAGTAATATGCTTGAGGATGTTGACAATTGCTGTCAGGAGAAGAAGGTGTGGCGTATATTTAGCCCTAGTTGTGTTGTTATGTATGAGACTCAACCTTTCTTCTTGGATAACACAGACACTGTGTCACCTGCAACTCAACCAGCCAAAAAAGGAACTAACAATAGGACAAGAACTATAATCATCAGTGTTATAAGTGGAGTAGTAGTGGTGGGAGCTCTATCTTCTATCATCATTTACTACTTCTGGTgcttgaaaagaagaaaagGCAAACAAACTATGCAGGAAGAAGGGTTAGGTTCATTTTCAAAAGAGCACATTGAGAGAGATGACTCAATGCATGGTGATCTTCCTTTGATGCCTCTGAGTATTATCCTACAAAGTACTGGTAATTTTTCTGATGAGCATAAATTGGGACAAGGTGGATTTGGTCCTGTTTATAAGGGTGTTTTGCCAGATGGAATGCAAATTGCTGTTAAAAGGCTCTCAAAAACCTCGGGTCAAGGTTTGGAGGAGCTAAAAAATGAAGTTATCTTGATTGCTAAACTTCAGCATAGGAACCTTGTGAGACTATTGGCATGTTGCATTGAGCAAAATGAGAAGCTGCTTGTATATGAGTACATGCCCAATTCTAGCCTTGATTTTCACCTATTTGACATGGAAAAACGTCAACAACTAGATTGGAAATCACGGCTAAATATCATTAATGGAATTGCAAAAGGACTCTTGTATCTTCATGAGGACTCGCGGCTTAGAGTGATTCATAGAGATTTAAAAACTagtaatattttgttagaCAATAATATGAATCCAAAAATCTCAGACTTTGGTATGGCAAGAACTTTTGGAGGAGATCAGAGACAAGCCAATACATTAAAAGTAGTTGGAACATATGGATACATGGCACCAGAGTATGCTATGGAAGGTTTGTTTTCTGTGAAGTCTGatgtttttagttttggtGTTCTTTTGCTCGAAATAATTAGTGGAAAGAGAAATAGTGGATTCTATCGCATAGAGGCCGGTCTTAGCCTTCTCATCTATGCTTGGAGGCTCTGGTGTGAAGACAAAGCTTTGGAATTAATGGACCCCTTACTAGAAAATTCATGTTCACCTGTTGAAGTTATGAAGTGTATACATATTGGCCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCTACCATGTCAACTGTGGTTCTTATGCTAGGAAGTGACACAGTGACCCTTCCCAGGCCCACACAGCCTGCATTTTCTGTTGGAAGAGTTGTCAAAGAACAAGAATCTTCAGCAAACAATTCTGGACATCAATCTGTCAATGTAGTAACAGTCTCTGATGTTAAACCTAGGTG 1988 0.4095 MHRQFPFTITFLFLISLSAAQNTAQDQSALDYRYACLDQSSTPPSSTYQANLNNLITTLSSDAATSNGFGNRTSGTGQNTVVYGLFFCRGDINTSFCHSCVQNISRMIMRHCPNNASAVLWYPFCLLRYSNQNFFAKLTVSPRIPMFDATQNFTSAGEFDSDARILMNGLIQTAAETPMMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLEDVDNCCQEKKVWRIFSPSCVVMYETQPFFLDNTDTVSPATQPAKKGTNNRTRTIIISVISGVVVVGALSSIIIYYFWCLKRRKGKQTMQEEGLGSFSKEHIERDDSMHGDLPLMPLSIILQSTGNFSDEHKLGQGGFGPVYKGVLPDGMQIAVKRLSKTSGQGLEELKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEYMPNSSLDFHLFDMEKRQQLDWKSRLNIINGIAKGLLYLHEDSRLRVIHRDLKTSNILLDNNMNPKISDFGMARTFGGDQRQANTLKVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKRNSGFYRIEAGLSLLIYAWRLWCEDKALELMDPLLENSCSPVEVMKCIHIGLLCVQEDAADRPTMSTVVLMLGSDTVTLPRPTQPAFSVGRVVKEQESSANNSGHQSVNVVTVSDVKPR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01468 662 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Bva09g01468 662 ProSiteProfiles Protein kinase domain profile. 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01468 662 Pfam Salt stress response/antifungal 41 132 IPR002902 -
Bva09g01468 662 Pfam Salt stress response/antifungal 151 243 IPR002902 -
Bva09g01468 662 CDD STKc_IRAK 350 615 - -
Bva09g01468 662 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Bva09g01468 662 Gene3D - 145 246 IPR038408 -
Bva09g01468 662 Gene3D - 29 134 IPR038408 -
Bva09g01468 662 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Bva09g01468 662 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 21 659 - -
Bva09g01468 662 Pfam Domain of unknown function (DUF3403) 617 662 IPR021820 GO:0004674
Bva09g01468 662 SMART serkin_6 344 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g01468 662 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Bva09g01468 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bva09g01468 662 SUPERFAMILY Protein kinase-like (PK-like) 327 633 IPR011009 -
Bva09g01468 662 Gene3D Phosphorylase Kinase; domain 1 308 419 - -
Bva09g01468 662 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01468 Bva-Chr9 8246352 8250766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01468 11 662 Receptor kinase-like Gene Family AT4G05200 40.943 7.35e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva09g01468 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01468 - - gmx:100798691 992.645