Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01461 ATGAAGAAGAAGCTCGATACCCGTTTTCCTGCTGCTCGAATAAAGAAGATAATGCAAGCTGATGAGGATGTTGGGAAGATAGCGCTAGCAGTGCCTGTTCTAGTTTCTAAGGCTTTGGAACTATTTTTGCAAGATCTGTGTGATCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACATTGTATACAAAGCTACAACGTCTTTGATTTTCTGAGGGATGTAGTCAGCAGGGTTCCTGACTATGGTCACGGCCATGGTCATGGCCATGCCCATTCTGAGGCTGGTGACGATCGAGTCCATCAAAAGAGAAGGAAAGCAGCTGGAAATGATTGCAATGACAGTGATGAAGAGTCAAGGAGGAACAAGATGCTTGAAGTGAGCCACACTGGTAGTACTGGTAGGGGAAGAGGTCGAGGGAGAGGAAGAGGCCGTGGACGAGGAGCCCGAGCTGCAGAAAGGGAGATCCATCATCAGGAGGTTGAATCTGAGCCCTGCGTATCTGCCCAGAATGTCAGCAAACCTAATCCTGGTACAAGTGTGGTGACAGAAAATGGTTCAGAGTCTAAAGAGTTATCAAAGGGGAATGTGACTCCTGATGAAGGAACTCAGTCTCTTCGTGATATTGATCTGAATGCCAATGTGAATGAAAATGAGGAGAAAAATGTCGCCAATGTGAATGAAAACGAGGAGAAAAATGCCAGCACTGTGGCAGCTCCTACCCCGGTGCCGGAACCTGCCACAGAGACTAAACATGAAGAATACCCAGGTTGGTCTCTTTCTGATGTGGACAAGATGGCCATTGACTCTATGCAGCTTGTACATCTTGATAGACCGTTAGAAGAGGATGAGGAGGATTATGATGAAGAAGGGTA 899 0.4572 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCIQSYNVFDFLRDVVSRVPDYGHGHGHGHAHSEAGDDRVHQKRRKAAGNDCNDSDEESRRNKMLEVSHTGSTGRGRGRGRGRGRGRGARAAEREIHHQEVESEPCVSAQNVSKPNPGTSVVTENGSESKELSKGNVTPDEGTQSLRDIDLNANVNENEEKNVANVNENEEKNASTVAAPTPVPEPATETKHEEYPGWSLSDVDKMAIDSMQLVHLDRPLEEDEEDYDEEG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01461 299 SUPERFAMILY Histone-fold 3 93 IPR009072 GO:0046982
Bva09g01461 299 MobiDBLite consensus disorder prediction 154 170 - -
Bva09g01461 299 MobiDBLite consensus disorder prediction 172 214 - -
Bva09g01461 299 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 298 - -
Bva09g01461 299 MobiDBLite consensus disorder prediction 228 265 - -
Bva09g01461 299 MobiDBLite consensus disorder prediction 91 214 - -
Bva09g01461 299 MobiDBLite consensus disorder prediction 228 244 - -
Bva09g01461 299 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bva09g01461 299 MobiDBLite consensus disorder prediction 91 133 - -
Bva09g01461 299 PANTHER HISTONE SUPERFAMILY PROTEIN 1 298 - -
Bva09g01461 299 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01461 Bva-Chr9 8205437 8208552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01461 1 284 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.664 2.00e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva09g01461 CBFD_NFYB_HMF 4.5e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01461 K21752 - gmx:100814712 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01461 09 8205437 8208552 Bva09g01461 09 8205437 8208552 ECH