Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01446 ATGGCTCAAAGAGTGGGCACAAGGCTTTTCATTAGCAGATTATCATTTTACACTACAAAAGATTATCTaaggaatttattttctcctttcgGAGATGTTACAGAAGCTCGTCTGGTGATTGACCAAAAGACTCAAAGGCCCAAAGGGTTTGGTTATGTCTCATACAAGACTGAAATTGAAGCCGAGAAGGCTATGAAAGCAATGAATGGCAGGATAATTGATGGGAGGCTGATCTTTGTTGAACCTGCAAAAACTAGTAGACCTAAAAAGCATGGTGCCTCTTG 284 0.3768 MAQRVGTRLFISRLSFYTTKDYLRNLFSPFGDVTEARLVIDQKTQRPKGFGYVSYKTEIEAEKAMKAMNGRIIDGRLIFVEPAKTSRPKKHGAS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01446 94 Gene3D - 2 93 IPR012677 -
Bva09g01446 94 PANTHER TRANSFORMER-2-RELATED 4 87 - -
Bva09g01446 94 SUPERFAMILY RNA-binding domain, RBD 6 89 IPR035979 GO:0003676
Bva09g01446 94 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Bva09g01446 94 CDD RRM3_RBM19_RRM2_MRD1 8 80 - -
Bva09g01446 94 SMART rrm1_1 8 81 IPR000504 GO:0003723
Bva09g01446 94 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Bva09g01446 94 PANTHER BNAA02G06700D PROTEIN 4 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01446 Bva-Chr9 8091887 8093240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01446 11 81 Eukaryotic Initiation Factors Gene Family AT5G06000 39.437 8.37e-11 54.7