Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01440 ATGGCATCCAACATCAACCAAAAAGAAGCTTATACAATACCAGAAGAGattgaagaagatgatgacgATGAAGTGCAGGAGGACTGGAGCGACTGGAATGGGGATGATGAGGAAGGTGGAGAGGGAGAGCCAGAATCAGATTTTCTGTGTCTCTTCTGTGATTCCAAGTTTGGCTCGTGCGGTTCCTTGTTTGAACACTGCACTGGAACTCACCACTTCGACTTCCATGGCATAAGGAAAGTTTTGAGCCTGGATTTCTATGGTTCCTTCAAGCTCATCAACTTCATTCGCTCACAGGTGGCAGAAAATAGATGTTGGAACTGTAAATTATCGTTTAAGTCCAACCAAGATCTACTAAATCATTTGCATGAAGTAGCAAACTTAGAGGACGTGAAGCTTCCATTGGATGATGATAGATATCTCAAGCCTTTCCTTCAAGACGATACACTCTTGTACAGTTTTGGTGAATTTGAAGAAGGTGAAGATGACCAAATTACACCAATTGATAAGCATGAAATTATAAGGGATTTGAAGAATTCTGAAGAGATTGCCAATGGTAATCAAAGTATTTTGGAAAAGATTGCAATTGATGATGATGTATATGATGATTCTAGAAGAAAGGATCATGCTTCTGCTTCTGATAATCATCTGAACCAAGCTAGTTCATCATTTGATTATGATCCTGAAGAAAGACACTTAATGGCTGGTTCTCCAAGTCTGGTTGCAAAGCATATCAAGAAggttaatgaaaattattttggggCTTACAGTTCATTTGGCATCCATCGGGAGATGCTCAGTGATAAGGTGAGAATGGATGCTTATGGGCAAGCTATTTTGAAGAATCCCTCTCTCCTAAATGGTGCTGTGGTTATGGACGTAGGTTGTGGAACTGGCATCCTTAGccTATTTGCAGCTCAAGCAGGGGCTTCAAGGGTGATTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGATTGCCAAAGATACTGGTCTCTGGCAGAGTAAAAGCCAAAGTGAAGGTGATAGTCTCCAGAAGGGAGTAATAGAAGTGGTTCAAGGCATGGTTGAAGTGATTGATAAAACTGTAGAAATTCAACCTCACAGTGTTGATGTGTTAATAAGTGAATGGATGGGATATTGCTTGGTGTACGAGTCCATGCTTGGCTCCGTCCTCTATGCGCGGGATCGATGGCTGAAGCCTGGAGGAGCTATTCTTCCTGACACAGCATCTATATTTGTTGCAGGGTTCGGGAAAGGTGGTACAAGTCTGCCTTTTTGGGAAAATGTGTGTGGTTTTGACATGTCTAGTATTGGCAAAGAACTTGTGAAAGATGCTGCACAAATCCCTATAGTTGACGTTGTGGACTATCAAGATTTGGTTACCAGCTCTGCAATTCTTCAGACTTTTGACTTAGCAACTATGAAGCCAAATGAAGTGGATTTCACTGCATCGGCAACTTTGGTACCAAAATGGGATGTCACAGAAGACAACACAATGCACTTGGAATATAAATCATGCCGCTGGTGTTATGGGGTTGTCCTGTGGTTTGAAACTGGCTTTACCGACAGATTCTGCCGGGAAGCACCAACTGTGTTATCGACATCCCCGTACACAACAAAAACACATTGGTCACAGACAATCTTAACCTTTCGAGAGCCTATTGCTGTGGGATTTGTGGAGGGAAATGCTGACAAACTGGCTGCCATTGGCACTGATGGCTGCCCTGCTGTGAAGATTGATGTGCGCATTAGCATTGTCCGTTCTACAGAGCATCGCAGCATTGACATTTCCCTAGAAGCTGTTGGAGTTGGTCGTGATGGCCGGAGACGCAGTTGGCCTGCTCAACTTTTTAGTCTGCAGTA 1874 0.4253 MASNINQKEAYTIPEEIEEDDDDEVQEDWSDWNGDDEEGGEGEPESDFLCLFCDSKFGSCGSLFEHCTGTHHFDFHGIRKVLSLDFYGSFKLINFIRSQVAENRCWNCKLSFKSNQDLLNHLHEVANLEDVKLPLDDDRYLKPFLQDDTLLYSFGEFEEGEDDQITPIDKHEIIRDLKNSEEIANGNQSILEKIAIDDDVYDDSRRKDHASASDNHLNQASSSFDYDPEERHLMAGSPSLVAKHIKKVNENYFGAYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGASRVIAVEASAKMAAVASQIAKDTGLWQSKSQSEGDSLQKGVIEVVQGMVEVIDKTVEIQPHSVDVLISEWMGYCLVYESMLGSVLYARDRWLKPGGAILPDTASIFVAGFGKGGTSLPFWENVCGFDMSSIGKELVKDAAQIPIVDVVDYQDLVTSSAILQTFDLATMKPNEVDFTASATLVPKWDVTEDNTMHLEYKSCRWCYGVVLWFETGFTDRFCREAPTVLSTSPYTTKTHWSQTILTFREPIAVGFVEGNADKLAAIGTDGCPAVKIDVRISIVRSTEHRSIDISLEAVGVGRDGRRRSWPAQLFSLQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01440 624 MobiDBLite consensus disorder prediction 1 43 - -
Bva09g01440 624 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 256 560 IPR029063 -
Bva09g01440 624 Pfam Methyltransferase domain 291 406 IPR041698 -
Bva09g01440 624 Gene3D Vaccinia Virus protein VP39 241 410 IPR029063 -
Bva09g01440 624 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 249 603 IPR025799 GO:0016274|GO:0018216
Bva09g01440 624 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 17 622 - -
Bva09g01440 624 SUPERFAMILY beta-beta-alpha zinc fingers 27 163 IPR036236 -
Bva09g01440 624 Gene3D - 413 615 - -
Bva09g01440 624 CDD AdoMet_MTases 291 409 - -
Bva09g01440 624 MobiDBLite consensus disorder prediction 14 43 - -
Bva09g01440 624 Pfam C2H2 type zinc-finger (2 copies) 50 124 IPR041661 -
Bva09g01440 624 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 17 622 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01440 Bva-Chr9 8055082 8058923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01440 1 623 C2H2 Transcription Factor Family AT3G12270 56.044 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva09g01440 Methyltransf_25 1.5e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01440 K11436 - gmx:100778113 808.905