Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01420 ATGAGCATGCTAGGCCTCAGAGACTTGTTTCTGATAGCTCCAACCCCTAATCTTCATCAACAGAGCCAACCCATTTCAGCAGAGCACCATTCCAATCTTCCAATGGCTACTTCAGCTGCTCTCAGTGTTGGACTTGGTATTTTCCCTCTTCTCACTGCCACTCCCTGTGTTCCTCAGAGCAATGGGGTTGAAGAATGTGGTAATAGCAGCAATCCCAATCAGTGGAACTTTAAGATTTGCCCGGAAGTGAATTCTGCGAGAAAAGGAATGATCGATGCGGAAGATGAAAACAACAAACAGTTGGGTGACGGCGACGAAAATGGCGAATTCCGGGTGTGCCAGGATTGTGGGAACAGGGCGAAGAAAGACTGCAACTTTATGAGATGTAGGACTTGTTGCAAGGGACGTGGGTATGACTGTACTACTCACGTGAAGAGCACGTGGGTACCCGCTTCACGGCGGAGGGAGCGGCAGATGATGGCGGTTCCAGGTGGTGGCAGTAGCGGTGCTGCTGAGGTTGGAGGTGCTTCTTCTGGGTCTCCTTCAGGTGCTAAGAGGCCCAGACCTTTTGGGTTATTACCAAATCCTGCAACTACTTCTCACAGTTCTACCTCTAATGCTGCTACACCAAGAAGCTTGGATACTAGTTCTTGTCACCAAGATGCTAGCTTCAAACAATCTTTACCTGGTAAAGTTAGAGCCCCAGCTGTGTTTAGATGCCAAAGACTGTCTGCTATTGGTAACGGAGAAGATGAATTTGCCTACTTGGCCACAGTGCATATTAGAGGCCATGTGTTTAAAGGGTATCTGTATGATCATGGTGCTGATGTGAAAGCTTCAGAACTGAACTTGGAAAACAACAGCAATGGAAAGAACAAGGAATGTTCTTCTCCAATGGCGGCTCCAACCAATCCCTTccctgcttctgcttctggtAGCTG 941 0.4697 MSMLGLRDLFLIAPTPNLHQQSQPISAEHHSNLPMATSAALSVGLGIFPLLTATPCVPQSNGVEECGNSSNPNQWNFKICPEVNSARKGMIDAEDENNKQLGDGDENGEFRVCQDCGNRAKKDCNFMRCRTCCKGRGYDCTTHVKSTWVPASRRRERQMMAVPGGGSSGAAEVGGASSGSPSGAKRPRPFGLLPNPATTSHSSTSNAATPRSLDTSSCHQDASFKQSLPGKVRAPAVFRCQRLSAIGNGEDEFAYLATVHIRGHVFKGYLYDHGADVKASELNLENNSNGKNKECSSPMAAPTNPFPASASGS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01420 313 Pfam Domain of unknown function (DUF702) 112 276 - -
Bva09g01420 313 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 310 - -
Bva09g01420 313 MobiDBLite consensus disorder prediction 285 313 - -
Bva09g01420 313 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 228 274 IPR006511 -
Bva09g01420 313 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 112 154 IPR006510 -
Bva09g01420 313 MobiDBLite consensus disorder prediction 161 220 - -
Bva09g01420 313 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 310 IPR007818 GO:0003700|GO:0006355
Bva09g01420 313 MobiDBLite consensus disorder prediction 195 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01420 Bva-Chr9 7919026 7921171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01420 1 304 C2H2 Transcription Factor Family AT5G12330 42.453 2.30e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bva09g01420 DUF702 9.2e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01420 - - jre:109012318 360.533