Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva09g01409 | atGCTTGAAGCTTCTCCAATGGACGAATCCTTCTCCGACCACAAGCTTTGCGGTTTCCTATGCGCGGTTCTTGCAATTACTCCGAACCAATGCGGTCCTTGTCCAGATATAGGTTTCAAGGAGCGGTGCAACATCTTTGGAGATGGTTCCAAGTTCGGGTTTCGGTCTGAAAGCGGTGTTGTGTTAGCTCCGGTGGACTTGGTGTTGAATCTGATTGAAAATGGGGATGTGTGTCCTTCTAATTCAGAACAATGCAAGGTTGTGGAGGGGGAGTCTAAGGTTAAATCCAATTGTAATGGCGAGGTTACGCCTCAGAAATCGGTAATGAATGGATTTGTGAGGAGGAAAAGTGATGGGGACCATGGGGTGAGTGAAAGTGGGAGCTTGAGGAAGAGGAGTCTGAGGAAGATTGGGATGGTGAATGGGAGTATTAGTGTGGTTAATCAGCTTCACGCCCTGGTTAGCCGCAAGTGCTTGAAGATTGATGCTTGTGTGCTTTGGGTTGAGCTTGGTGGTTGTGGGGAGGCCCGGGCGGTGGTACTGGTTGATGTGTACCTTCCTGTTGCACTGTGGAGTGGCTGGCAGTTTCCGAGATCTGCATCGATTGCTGGTGTACTTTTTGGGCATTTGAGCTGCAATTGGGGTGAGAGAAGTTCAATGCTTTCATGTTCAGACTATTCTAGGAAGATTCTTGGAGATAATGATAGCATTTGGAACCTTTCTGATTGTCATGTCCTTGGTTGCAAGCTCCATCACCTTGCGAGTGATTCTTCAAAGAAAAGGTTGTTTGAActacatgaaatttttaagaagGTACCTAGTGTAGGAAAGCAACAGAAGTCTGATAGTTGCAGGATAATGCCCATGGACGAGTCTCACAGATCTGGGATTTGGGACATATCTGATGACATTTTAACTAGAATTATAGCTTCTCTTGCACCAGTGGACCTCACTAGGATTGCTGCAACTTGTTGCCATTTAAGATCCTTGGCTGCTTCTGTAATGCCTTGTGCAAAGTTAAGACTGTTTCCCCATCAGCAGGCTGCAGTTGAGTGGATGTTGCATCGAGAGAGAAATGCTAAAGCATTGCCTCATCCTTTATATGTTGCTCTCTCAACTGAGGATGGCTTCAGTTTACATGTAAATACTGTATCTGGTGAAATCGTCACCGGGGAAGCTCCCACAATTGAAGATTTTCGAGGAGGAATGTTCTGTGATGAACCTGGCTTGGGTAAGACCGTAACTTTGCTTTCTCTTATTCTGAAGACCCAAGGTACACTGGCAGACCCACCAGATGGGGCACAAGTAACTTGGTGTCAGCATAATGGTGATCAGAAATGTGGCTATTATGAGCTTAGTGGTAACAGCAGCTCTGGTAGTTGCATGTTGGGGAAGAGGGATGTATGGGAGGATgattgtaaaaataaagagaatgaTAACTACTCCTCAAAAAGAGCCAAGGTGATGGTTACTGACAAGCATATTACTGCTTTTCATTATTCATGTGCcagcaaagaaaagagatcaCCTTTGGGTGCATGCTCTGAGCAACATATGCCTGCAAGTCGATGCTCTAGGAGCTTGAGTCGGATAAAACAAGATCTACATCTCTCCTATGAGCAGGGAGCTTTCTTTTCCAATGAAAAAAAGGTTGGTGAAAACTCAAGCAAAACAAAGCATGCATCAGATGCTGTATCCCATGTATCTCAAAACAAGCTAGTTGATACCTCATATGGACATGGAAAGGGCAGGAGTGCTAGGCAGCCTGCAACAGATAGTGTTGAATCTAATGATACCTGGATTCAGTGTGATGCTTGTCACAAGTGGCGAAAGCTTACAGATACCAATACAGCTAATATTAGTGCAGCATGGTTTTGTAGTATGAACACTGACCCTTTGTATCAGAGTTGTTGTATACCCGAACAATCTTGGCAGAATGGCTGTCAAATAACTAACTTACAAGGATTTCACTTGAAAGGAACTGCTGGTGGTCAGAAAcaaaatgtttcatttttcactGGTATACTTAAGGAGCAGTATGCATTGAAGAATtctcaaacaaagaaagccCTTACTTGGTTAGCTGGGCTTTCTGCAGAGAAACTTGTGTATATGGAAACAATTGGCTTACGGGGTCCTATTTTAGGTACCTACAATATGTCCAGTGAATGTGCATTCCACAAAATATTTCAAGCATTTGGCCTCATAAAAAGAGTAGAGGAAGGCGTATGCAGGTGGTACTACCCTCCAAATCTTAATAATTTGGCCTTTGATGTGTCTGCCCTTAGAATTGCTCTCTGTGAGCCGTTAGATTTTGTTAGGCTATACTTGTCAAGAGCAACCCTAGTAGTTGTTCCTTCAAACTTGGTTGATCACTGGAAAACACAAATTGAAAAGCATGTCAAACATGGTCAATTGAGAGTTTATGTTTGGGTTGATCATCGAAAGCCGTCTGCACATAATCTGGCTTGGGACTATGATGTTGTCATTACTACATTTAGTCGTTTGAGTGCAGAGTGGAACCCGCATAAGAGAAGTGTTCTGATGCAAGTACATTGGCTCAGGATCGTTTTGGATGAAGGGCACACTCTTGGCTCAAGTGTTAGCTTGACAAACAAGTTGCAAATGGCAATTTCATTGATGGCATCAAATCGTTGGATATTAACAGGAACACCAACACCTAACACTCCTAACAGTCAACTATCACATCTGCAACCACTGCTAAAGTTTCTTCATGAAGAAGCTTATGGACAGAATCAGAAGTCGTGGGAAGCTGGCATTCTTAAGCCATTTGATGCTGAGATGGAGGAAGGAAGGTCTCGTCTATTACATTTACTTGAAAAATGCATGATTAGTGCAAGAAAGATAGATCTGCAAAATATTCCACCATGCATCAAGAAAATTGTTCTTCTAGATTTTACTGAGGATCATGCCAGAAGTTACAATGAATTGGTACTCACAGTTAGGAGGAATATATTATTGGCTGACTGGAATGATCCTTCACATGTTGAGAGTTTACTAAATCGAAAACAGTGGAAAACCCGGAGCACAACTATTAAAAATGTTAGGCTCTCTTGCTGTGTTGCTGGACATATTAAAGTTACACACGCTGGTGAAGATATTCAAGAAACAATGGATATGTTAGTAGAAAGTGGTTTGGGTCCTGTTTCTGGAGAGTATAATACTATAAgatataatcttatttttggtGGCTACTGTGTCAGGTGCAAGGAATGGTGCCGCCTTCCTTTCATTACACCTTGCCGGCATCTGCTGTGCCTTGATTGTGTGTCTTTAGACAGTACAAAGTGTACTTTTCCTGGCTGTGGTAATTTATATGAGATGCAGAGTCCTGATACACTAGCCCGCCCTGAAAATCCCAATCCAAAGTGGCCTGTACCCAAAGATCTGATTGAGCTACAACCTTCATATAAACAGGATAATTGGGATCCTGATTGGCAATCAACTTCTAGTAGTAAAGTTTCATATCTTGTACAGAAATTGAAAGCTTTGCAGGAAACCAATAAAGAGAGGGGTTATTACCATATAGATAATGGCAATGATCAATATCATGCTGAGAAGAGTTGCCCTTTGCAGACGAGAGATACTGAATCATCACACCAGGAATACCACATAATCAGCACCAAAACAAATATGGCCCCAGAgaaagttttgatattttctcagTTTCTTGAGCATATACATGTCATTGAACAGCAGttGACTTTTGCCGGTATCAAGTATGCTGGGATGTATAGCCCTATGCATTCTAGTATCAAGAAGAAGGCACTAGCCACATTCCAGCATAATTCAAGTTGTTTGGCACTCGTGATGGATGGAAGTGCTGCATTGGGTCTTGACCTGAGTTTTGTCACACACGTATTTCTAATGGAACCTATCTGGGACAGAAGCATGGAGGAACAAGTAATTAGTCGTGCTCATCGCATGGGTGCTTCTCGTCCTGTTCATGTGGAAACATTAGCAATGCGTGGTACAATTGAAGAGCAAatgctaaaatttttacaGAATGCTGATAAATGTAGAGGGTTCCCAAGTAAAGATGTCAAATCTGAAGATGAGGGGGGACGAGGATATCGTTCATTGCATGATTTTGCCGAAAGCAGTTATCTGCAGGAACTTAGATCTTTTCTCACTAACCCTGAACTTATAGAAGgagctta | 4181 | 0.4119 | MLEASPMDESFSDHKLCGFLCAVLAITPNQCGPCPDIGFKERCNIFGDGSKFGFRSESGVVLAPVDLVLNLIENGDVCPSNSEQCKVVEGESKVKSNCNGEVTPQKSVMNGFVRRKSDGDHGVSESGSLRKRSLRKIGMVNGSISVVNQLHALVSRKCLKIDACVLWVELGGCGEARAVVLVDVYLPVALWSGWQFPRSASIAGVLFGHLSCNWGERSSMLSCSDYSRKILGDNDSIWNLSDCHVLGCKLHHLASDSSKKRLFELHEIFKKVPSVGKQQKSDSCRIMPMDESHRSGIWDISDDILTRIIASLAPVDLTRIAATCCHLRSLAASVMPCAKLRLFPHQQAAVEWMLHRERNAKALPHPLYVALSTEDGFSLHVNTVSGEIVTGEAPTIEDFRGGMFCDEPGLGKTVTLLSLILKTQGTLADPPDGAQVTWCQHNGDQKCGYYELSGNSSSGSCMLGKRDVWEDDCKNKENDNYSSKRAKVMVTDKHITAFHYSCASKEKRSPLGACSEQHMPASRCSRSLSRIKQDLHLSYEQGAFFSNEKKVGENSSKTKHASDAVSHVSQNKLVDTSYGHGKGRSARQPATDSVESNDTWIQCDACHKWRKLTDTNTANISAAWFCSMNTDPLYQSCCIPEQSWQNGCQITNLQGFHLKGTAGGQKQNVSFFTGILKEQYALKNSQTKKALTWLAGLSAEKLVYMETIGLRGPILGTYNMSSECAFHKIFQAFGLIKRVEEGVCRWYYPPNLNNLAFDVSALRIALCEPLDFVRLYLSRATLVVVPSNLVDHWKTQIEKHVKHGQLRVYVWVDHRKPSAHNLAWDYDVVITTFSRLSAEWNPHKRSVLMQVHWLRIVLDEGHTLGSSVSLTNKLQMAISLMASNRWILTGTPTPNTPNSQLSHLQPLLKFLHEEAYGQNQKSWEAGILKPFDAEMEEGRSRLLHLLEKCMISARKIDLQNIPPCIKKIVLLDFTEDHARSYNELVLTVRRNILLADWNDPSHVESLLNRKQWKTRSTTIKNVRLSCCVAGHIKVTHAGEDIQETMDMLVESGLGPVSGEYNTIRYNLIFGGYCVRCKEWCRLPFITPCRHLLCLDCVSLDSTKCTFPGCGNLYEMQSPDTLARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVSYLVQKLKALQETNKERGYYHIDNGNDQYHAEKSCPLQTRDTESSHQEYHIISTKTNMAPEKVLIFSQFLEHIHVIEQQLTFAGIKYAGMYSPMHSSIKKKALATFQHNSSCLALVMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPVHVETLAMRGTIEEQMLKFLQNADKCRGFPSKDVKSEDEGGRGYRSLHDFAESSYLQELRSFLTNPELIEGA | 1393 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva09g01409 | 1393 | SUPERFAMILY | F-box domain | 290 | 333 | IPR036047 | GO:0005515 | |
| Bva09g01409 | 1393 | CDD | SF2_C_SNF | 1211 | 1327 | - | - | |
| Bva09g01409 | 1393 | Gene3D | - | 1117 | 1360 | IPR027417 | - | |
| Bva09g01409 | 1393 | CDD | DEXDc_SHPRH-like | 774 | 951 | - | - | |
| Bva09g01409 | 1393 | PANTHER | TRANSCRIPTION TERMINATION FACTOR 2-RELATED | 125 | 1374 | - | - | |
| Bva09g01409 | 1393 | PANTHER | OS01G0952200 PROTEIN | 125 | 1374 | - | - | |
| Bva09g01409 | 1393 | SMART | helicmild6 | 1235 | 1317 | IPR001650 | - | |
| Bva09g01409 | 1393 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 334 | 423 | IPR027417 | - | |
| Bva09g01409 | 1393 | ProSitePatterns | Zinc finger RING-type signature. | 1088 | 1097 | IPR017907 | - | |
| Bva09g01409 | 1393 | Gene3D | - | 764 | 954 | IPR038718 | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva09g01409 | - | - | adu:107471940 | 1966.43 |
Showing 1 to 1 of 1 entries