Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01354 atgaagaaattaaagtatCGCAAGATAGAGATGGAGGAGAGCTCACGTGGCCGGCAGGCAGGCCGAATTGCCGGAAAAGATGTGTTATCAAGGCTATTATCTGATGCAGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACAAAGAGGACATGTACGAAGGAAATATCGTGTTTCAGGATTGACTTCTCAACCCACAAGAGAACTTGTGTTTCCTGTTGATGATAACTCTACTATGAAtggaaaatcagaaaaaaaggCAAACTGTTTACCTATGGAGGCCTGTAAAATTTTTGAGGGCCAACGTTGTACAAAAAGGTTGGATGAGAAGCAAATTACTGCTCTTCTGAAAGTTACTTGTCAGAGACCTCCGGATCGGGAAAATGACATTTTGCGGAAAATTCAACATAATGCTTATGATCAAGATCCCCATGCGAAGGAATTTGGGATTAAAACCAGCGGAAAGCTAGCTTCTGTTGAAGCACGGATTCTTCCTGCCCCTTGGGACTTAGAGGAAGTTATGGGGTTAGTGTTTTTAAGACTTGGAAGATGTAGAGGTTTATATTTGACGACTGGTGCTTATGGGAAACCCATCTTTGTCGATAAACTAGGTGCTAGTCTGgattcaatttcaaatggaGTGCCTTTGGAAGATTTTGGACATGGTCATCCAGATCCTAATGTTACGGCTGTATTAGCTTGGCTTTCTATTCTTGCACAAGCCAACGAAGGCAAGAAACCAGGGGAGAAAATGATCTCTGTATTTGATATTGTGAAGAAGCACTGGGAAACTTAtggaagaaatttcttttctagataCGGCTATGAGGAATATGAATCTGAAGGTGCTAATAAGATGGTAGAATATCTACAAGCATTTTTCTCTAAGAGGAAGCCTGGTGATAAATTTGGAAGTTATTCCATCCAGTTTGCTGATGATTTCACGTATACTGGTCCAGAAGATGGAAGTATGGTATCAAAACAAGGTGTCTGGTTTGTTTTTACAGATGGATCAAGAATTATATTCCACTTATCGGGAACTGGCTCTGCAGGTGCAAGTATTAGAGTTTATATTGAACAGACAATAATAGCCTTATGGAGAACAAGACTGTTAGCCCCTGAACAGAAAGCACAAATTGCAGAGCTTCCGATCAAGATCAGTGATGGAGAAATTCGGATGTACATTGTGGATTGTGAATCAAGTCATGCTAGGCATGGAGCAAAGACTCAAGATGAAGAAGGCAGGCTtagatttcattttcagtCTTTCGTGTCATTCGGTGCTGCCTCCAGGACAATAATGGCCTTATGGAGAACAAGACTGTTAACCCCTGAGCAGAAAGCACAAACTTCAGAACTTCCGATCAAGATACCGGAAATAAAATTGGCTGACATTCCTGATGTTGAAGTAATAGATCCAGTTTCAGACTATTTGGAGCTGCTGGAGaCATTTGATTTCCCCCTAATCAAAAATCTTCTTACATGGCCAGATTTTAGGTTTATATTTGATGCAACGCATGCAGTTACTGGTGCTTATGGGAAACTCATCTTTGTTGATAAACTAGGTGCTAGTCTGGATTG 1598 0.3886 MKKLKYRKIEMEESSRGRQAGRIAGKDVLSRLLSDADRVKIKKALRGVKVEVTQRGHVRRKYRVSGLTSQPTRELVFPVDDNSTMNGKSEKKANCLPMEACKIFEGQRCTKRLDEKQITALLKVTCQRPPDRENDILRKIQHNAYDQDPHAKEFGIKTSGKLASVEARILPAPWDLEEVMGLVFLRLGRCRGLYLTTGAYGKPIFVDKLGASLDSISNGVPLEDFGHGHPDPNVTAVLAWLSILAQANEGKKPGEKMISVFDIVKKHWETYGRNFFSRYGYEEYESEGANKMVEYLQAFFSKRKPGDKFGSYSIQFADDFTYTGPEDGSMVSKQGVWFVFTDGSRIIFHLSGTGSAGASIRVYIEQTIIALWRTRLLAPEQKAQIAELPIKISDGEIRMYIVDCESSHARHGAKTQDEEGRLRFHFQSFVSFGAASRTIMALWRTRLLTPEQKAQTSELPIKIPEIKLADIPDVEVIDPVSDYLELLETFDFPLIKNLLTWPDFRFIFDATHAVTGAYGKLIFVDKLGASLD 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01354 532 ProSiteProfiles PAZ domain profile. 33 82 IPR003100 GO:0005515
Bva09g01354 532 SUPERFAMILY PAZ domain 26 145 IPR036085 GO:0005515
Bva09g01354 532 Gene3D - 259 394 - -
Bva09g01354 532 Gene3D paz domain 18 89 - -
Bva09g01354 532 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 235 373 IPR045244 GO:0004614|GO:0005975
Bva09g01354 532 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 472 532 IPR045244 GO:0004614|GO:0005975
Bva09g01354 532 CDD PAZ_argonaute_like 30 103 - -
Bva09g01354 532 Gene3D - 486 532 - -
Bva09g01354 532 Gene3D - 191 258 - -
Bva09g01354 532 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 195 235 IPR045244 GO:0004614|GO:0005975
Bva09g01354 532 SUPERFAMILY Phosphoglucomutase, C-terminal domain 273 367 IPR036900 GO:0016868|GO:0071704
Bva09g01354 532 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 472 532 - -
Bva09g01354 532 SUPERFAMILY Phosphoglucomutase, first 3 domains 482 527 IPR016055 GO:0005975|GO:0016868
Bva09g01354 532 Pfam Argonaute linker 2 domain 131 173 IPR032472 -
Bva09g01354 532 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 195 235 - -
Bva09g01354 532 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 235 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01354 Bva-Chr9 7408273 7416449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01354 20 174 Eukaryotic Initiation Factors Gene Family AT5G43810 67.416 5.76e-69 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01354 K11593 - gmx:100816999 247.669