Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01351 ATGGTAATTGAGTTGTCCCCAGGATTAGGTTCAACATACAATCCAGGCTTATTAGGATCACCATATCAGTGGCTGAGAGAGCAGAGATTGGGCAGCAACACAGGTTTAAATCTGATTGGTCTTCTTCGCGAATGTGCTCACCATGTGGCATGTGGCAAAATCAAGAATGCAGATATGGGACTTGATTATATTTCTCAGCTGGCCTCTCCTGATGGTGATTCAGTGCAGAGAGTGGCCACTTATTTCAGTCAAGCACTTGCTTGCAGAATAGTCAAACAATTGGCTGGTGTCTCTAATGCTCTCAATTCTGCAGAAACATCATCAATCTCAGAAGAACCTTCTGcacataattatttctttaacttGTGCCCATTCTTGAAGGTTGCCTACTTGGTCACCAACCAAGCCATTGTTGAAGCCATGGAGGAGGAAAAAATGGTTCACATTATTGATCTCCATTCTTCTGAACCTGCTCAGTGGGTTGATCTTATGCAGACTTGGAAGAAACGAAGAGAAGGCCCGCCACATCTGAAAATCACAGGCATTCATGAGAAGAAACAAGTTCTAAGTGAAATGGCATTTCACTTGGCAAGGGAAGCTGGAAAAATTGATTTCCCTTTACAATTCTGTCCTGTTGTGAGCAAGCTTGAAGATCTTGATTTTGAAAGCTTGCCTGTTAAGAGAGGAGAAGCTCTTGCAATCAGTTCTGTCCTTCAGCTGCATTGTTTTCTTGCAACTGATGATAAAATGCTTGGCAGAAACTCACCGGCACCATCGATAAATCTTCATAGAGCAGTTCACATAAACGAAAAGACTTTCAGGGAGTTGCTTGACCAGAAAGATATGATCCATGGTTACTTGAGACCAGATTCTTCATTGCCACCTCTTCCTTTAAGTTCTTCACCTAAGATGGAAATCTTTCTAAATGCTCTAAGAAAACTCCAACCAAAAATAATGGTGATTACTGAACCAGAATCAAACCTTAATGTGCCTAATTTAGTGCAGAGGTTTGATGAGGCATTGCACTATTATTCTGCACTTTTCGACTGCTTGGAATCTAGTGTGTCAAGAACATCATTGGAAAGACAAAAGCTTGAAAGCATGCTTCTTGGGGaggaaataaagaatattattgCATGTGAGGGGTTAGAAAGAAGGTACAGGTTTGAGAAGCTTGAGAGATGGATTCCAAGGCTGCAAATGGCTGGGTTTGGAAGGGTACCTTTTAGCTACACTGCAAAGTTTCAGCCAAGGAGGCTGTTGGAGAGCTATGACCAAAACCACAAGTATAAACTTCAAGAAGAGAATGATTGTTTGCTTATCTGCAGGCGTGATACACCTCTTTTCTCCATATCTGCCTGGAAATTTGGCCAATg 1376 0.4092 MVIELSPGLGSTYNPGLLGSPYQWLREQRLGSNTGLNLIGLLRECAHHVACGKIKNADMGLDYISQLASPDGDSVQRVATYFSQALACRIVKQLAGVSNALNSAETSSISEEPSAHNYFFNLCPFLKVAYLVTNQAIVEAMEEEKMVHIIDLHSSEPAQWVDLMQTWKKRREGPPHLKITGIHEKKQVLSEMAFHLAREAGKIDFPLQFCPVVSKLEDLDFESLPVKRGEALAISSVLQLHCFLATDDKMLGRNSPAPSINLHRAVHINEKTFRELLDQKDMIHGYLRPDSSLPPLPLSSSPKMEIFLNALRKLQPKIMVITEPESNLNVPNLVQRFDEALHYYSALFDCLESSVSRTSLERQKLESMLLGEEIKNIIACEGLERRYRFEKLERWIPRLQMAGFGRVPFSYTAKFQPRRLLESYDQNHKYKLQEENDCLLICRRDTPLFSISAWKFGQ 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01351 458 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 18 456 - -
Bva09g01351 458 Pfam GRAS domain family 39 455 IPR005202 -
Bva09g01351 458 ProSiteProfiles GRAS family profile. 29 455 IPR005202 -
Bva09g01351 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01351 Bva-Chr9 7396777 7398153 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01351 15 455 GRAS Transcription Factor Family AT1G50420 50.552 5.39e-144 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva09g01351 GRAS 7.3e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01351 - - gmx:100779726 560.066