Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01349 ATGGACCCAGGTTCACCATACCAATGGCTCAAAGAGCTGAGATGGGAAGACAGAGGCATATATCTGGTCCGTCTTCTTAATGCCTGTGCTGGCTATGTTGCCACTGGCAACATAAAGAATGCAAATTTGGGTCTTGAGTATATTTCTCACCTTACTTCCCCTGACGGAGATGCAATGCAGCGGATGGCCACGTATATCAGTGAAGCACTTTCTTTCAGAGTGTTCCAACATTTGCCTGCTGCATGTGAAATTATTATGAATAGTTCTTCAAGAATGTCAAATTTGGAGGAACTTGTTGTTAAAAGCTTGTTTTATGAATTGTGTCCTTTTTTGAAGGTCTCATACTTGATCACAAATCAGGCCATTGTTGAAGCAatggaaggagaaaaaatggTTCATATAATTGACCTCAATGCTTCTGAGCCAGCTCAGTGGATCAACCTCTTAATGGCTCTAAAGAAGCGTAGAGAAGGCCCTCCACATCTGAAAATTACAGTTATTCATGAAAAGAAGGAGGTTTTAGAGCACGTGGGTCTTCAATTGATTGGAGAAGCTGAAAAACTGGAATTCCCTTTGCAATTTATTCCTATAGTCAGCAAATTGCAAGATCTTGACTTTGATAGCTTGTCTGTGAAGACAGGAGAAGCTCTTGCCATCAGCTCTGTGCTTCAGCTGCATTCTCTACTTGCAGCTGATAATGAAATGTATGCAAGAAGCTCCCCAGCAGCATCAAAGAATCTGCAGAGAGCGGTGCACATGAACCAACGAACATTCGCCGAGTGGCTTGAGAAGGACAAGATCAATGCATATATCTTGAGTCCTGATTCAGCATTATCACCTCTTTCTCTTAGTGCTTCACCCAAGATGGGGAGCTTTCTAAATGACCTGTGGAAACTCCAACCAAAATTAATGGTGATTACTGAACAAGAATCTAATCTTAATGGATCTAATCTGATGGAGAGAGTTGATAAAGTATTGCACTTTTATGGCTCACTGTTCGATTGTTTGGAGTCTACCGTTTCAAGAACATCATTAGAGAGACAAAAGCTGGAGAGGATGCTTTTGGGAGAGGAAATTAAGAACATCATTGCATGTGAGGGActgaagagaaaggaaagacaTGAGAAACTTGAGAAATGGATTCCGTGGCTTGAATTGGCAAGCTTTGGGAGAGTACCTTTCAGCTATGATGGGATGTATCAAGCGAAGAGGTTGTTGCAGAACTATGGACATGGATACAAGCTTCGCGAAGAGAATGGTTTTTTGTTCATCTGTTGGAATGATAAACCCCTTTTTTCGGTATCAGCCTGGAGGTTTAGGAGATG 1325 0.4053 MDPGSPYQWLKELRWEDRGIYLVRLLNACAGYVATGNIKNANLGLEYISHLTSPDGDAMQRMATYISEALSFRVFQHLPAACEIIMNSSSRMSNLEELVVKSLFYELCPFLKVSYLITNQAIVEAMEGEKMVHIIDLNASEPAQWINLLMALKKRREGPPHLKITVIHEKKEVLEHVGLQLIGEAEKLEFPLQFIPIVSKLQDLDFDSLSVKTGEALAISSVLQLHSLLAADNEMYARSSPAASKNLQRAVHMNQRTFAEWLEKDKINAYILSPDSALSPLSLSASPKMGSFLNDLWKLQPKLMVITEQESNLNGSNLMERVDKVLHFYGSLFDCLESTVSRTSLERQKLERMLLGEEIKNIIACEGLKRKERHEKLEKWIPWLELASFGRVPFSYDGMYQAKRLLQNYGHGYKLREENGFLFICWNDKPLFSVSAWRFRR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01349 441 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 439 - -
Bva09g01349 441 ProSiteProfiles GRAS family profile. 13 438 IPR005202 -
Bva09g01349 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 439 IPR005202 -
Bva09g01349 441 Pfam GRAS domain family 22 438 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01349 Bva-Chr9 7383918 7385889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01349 5 441 GRAS Transcription Factor Family AT1G50420 53.812 2.73e-165 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva09g01349 GRAS 2.2e-119 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01349 - - gmx:100779726 581.252