Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01342 ATGGAGAACAATTCCTCCTCTGGAAACTCTTTTGGGAATCATACAGTTGAAGTTGCATCTGGGGATGATGATTCATACTTCTCTTCGTTCCCAGCAGGCATTAGATTCATGCCCACAGATGCTGaactcattatttattatctagGAAAAAGAATTCTCAATGAACCTTTACCTCCCAACCAAATTGTTGAAGTTGTGTTATACAAGTTTCATCCTCAAGAACTTTCACAATTTAGGACACAAGGGGAAGGTGAATGGTTCTTCTTCACTCCAAGAGATAGAAAGTATCCTAATGGTAAGAGGCCGGCGAGAGCTGCGAGTACCGGCTATTGGAAGGCCACCGGAGCTGAGAAAATTGTGTTTGCCGATGACGGTGTGCGTGTTGGATACAAGCAAGCATTGGTATTTTACGAAGGAAAACCTCCCAATGGTGTGAAAACTAATTGGATGATGCATGAGTACAGATTGCATAACCCTCCTCGGAGGCAAAGAGCTGGTCCTCATGATATGAGGCTTGATGACTGggttttatgtaaaatatacgAGAAGGGGAATAGTAAAAGGAGACATGTTGAGGAAAACAATGCAGAAGATAACTCCTCGAAAAAAAGGCAGCAAATAGAGAGTAGTGACACAGTGGAAGATGCTGCTAATGCTGAAACGCCACAGAATGACAATGGTTTTCGCGATGCCAATGGAGATTTTGATCACACTCTGGAAAATTATCAGAATGACAATGGTTTTCGTGATGCCAATGGTGATTTTGATCGCATTCTGGAAAATTATCAGAATGACAATGGTTTTCGCGATGCCAATGGAGATTTTGATCACACTCCGGAAAATTATCAGAATGCCAACGGTTTTCGTGATGCCAATGGTGATTTTGATCGCACTCTGGAAAATTATCGGAATGACAATGGTTTTCGTGATGTCAATGGAGATTTTGATCACACTCTGGAAAATTATCAGAATGACAATGGTTTTCGTGATGCCAATGGTGATTTTGATCGCACTCTGAATAATTATCAGAATGATAATGATTTTCTTGACGCCGGTGGGAATTCTAATCAGGTTCCAGAAGATTATCAGAACGATAATGGTGTTCTTGACTCCAATGATGGTGATGATTTTCCTAATGCCATTCTAGAAGATTATCAGCGTGAAACTGACAGCAGGGATTATTTTGATGAGTATTTTAACATGGACAACTATCTTGATCACTTTTCTGACATAGACAAGAAGTCACCTCCTTCCTCTGACAAGGACAAGAAGTCACCTCCTTCCTCTGACAAAGACAACAAGCCACCTCCTTCCTCCTCATA 1322 0.4024 MENNSSSGNSFGNHTVEVASGDDDSYFSSFPAGIRFMPTDAELIIYYLGKRILNEPLPPNQIVEVVLYKFHPQELSQFRTQGEGEWFFFTPRDRKYPNGKRPARAASTGYWKATGAEKIVFADDGVRVGYKQALVFYEGKPPNGVKTNWMMHEYRLHNPPRRQRAGPHDMRLDDWVLCKIYEKGNSKRRHVEENNAEDNSSKKRQQIESSDTVEDAANAETPQNDNGFRDANGDFDHTLENYQNDNGFRDANGDFDRILENYQNDNGFRDANGDFDHTPENYQNANGFRDANGDFDRTLENYRNDNGFRDVNGDFDHTLENYQNDNGFRDANGDFDRTLNNYQNDNDFLDAGGNSNQVPEDYQNDNGVLDSNDGDDFPNAILEDYQRETDSRDYFDEYFNMDNYLDHFSDIDKKSPPSSDKDKKSPPSSDKDNKPPPSSS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01342 440 MobiDBLite consensus disorder prediction 343 370 - -
Bva09g01342 440 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 20 271 - -
Bva09g01342 440 MobiDBLite consensus disorder prediction 211 228 - -
Bva09g01342 440 MobiDBLite consensus disorder prediction 343 379 - -
Bva09g01342 440 Gene3D NAC domain 39 188 IPR036093 GO:0003677|GO:0006355
Bva09g01342 440 MobiDBLite consensus disorder prediction 187 248 - -
Bva09g01342 440 PANTHER NAC TRANSCRIPTION FACTOR 56 20 271 - -
Bva09g01342 440 MobiDBLite consensus disorder prediction 407 430 - -
Bva09g01342 440 Pfam No apical meristem (NAM) protein 31 156 IPR003441 GO:0003677|GO:0006355
Bva09g01342 440 SUPERFAMILY NAC domain 28 183 IPR036093 GO:0003677|GO:0006355
Bva09g01342 440 ProSiteProfiles NAC domain profile. 30 183 IPR003441 GO:0003677|GO:0006355
Bva09g01342 440 MobiDBLite consensus disorder prediction 187 210 - -
Bva09g01342 440 MobiDBLite consensus disorder prediction 407 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01342 Bva-Chr9 7325500 7327513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01342 30 192 NAC Transcription Factor Family AT1G61110 53.216 1.50e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva09g01342 NAM 2.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01342 - - cit:112497912 231.876