Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01322 ATGGTAAGCATCAAGGCCTCTCACACAGTCATTCCAAGCGAACCAACTCCAAAGGTCCTTTCTGGTTTGGCAGAGATTGACCGATTATTCCACCCTGCCATTGCTTACACACATCTCATCTATGTCTACAAGCCAACCCATCAACACAGCACCATCACTGATGCCACTGAAAAGATCAGAGACTCTCTCAGCAAGATTCTGGTCCACTACCACCCTGTTGCTGGTAGACTACGCTACatagaaaatggaagattCGAGGTGGATTGCAATGCAAAGGGAGCCATATTGCTTGAAGCAGAATCAACAAAATCAGCTGCAGATTATGGAGATTTCACCCCCAATGAGAAGATCAGAGAGCTTGTACCAATGGTCCAGGTTGATATTACCAAATCCATAGAAGATTTTCCCTTGTTGGTTGTTCAAGTAACAAGATTGAACTGTGGCGCCCTTTGTGTTGGGATGAAAATCTCACATGTTTTGTTTGATGGAGAAGCTATTGTTTCTTTCATCAACTCATGGACCAAGATTGCTAGTGGGGAGAAGTTGGATGAAGGAGAAATCCCACCTATGGATCGAACCGTGCTGAAACGACAGGAACCAGTTCAAGCACCTCGCTTTGAGCACCAAGAGTTCAACCCTCTTCCCACTATACTGGGTGCCTCTGACAGCCTTGGCGTGGAGGAGTCAAAGAAGGAAACAGATGTTGCAATGGTGAAGCTCACAAATGAGCAAGTAGTCAAGTTAAAGAACAAAGCTAATGATCAAGCAGCCATGGATGGAAAGGATCAGACTCTGAATCATCATCGTCCTTACAGCAGATTTGAATCTGTAGCTGGTTATATTTGGAGGTGTATAGCCAAGGGCCGTCAAGGCGATCCACTCCAGCCAACAGGTATTGTCATCATTGTGGATATCCGTACCAGATTGAAGCCTCCACTGCCCAAAAACTACTTTGGAAATGCTGTGCATCACCAGGTGACACCCATATGTCACTCTGGAGATATCATATCAAAGCCATTGAGCTATGCTGCCAGCAAGATAAGGGAATCGCTGGAGACGCTCACAGATGAATACTTGAGGTCGCAGCATGATTATCTGACAAGACAGGCGGGTACTTGGGATTGGAACAGAACCATTTATAGAGTCTTTGAGAACATGGGACAGCTTTTTCTTGGGAATCCCAACATGATGTTTTCGAGTTGGATGAGGATGCCGCTGTATGATGCAGATTTTGGGTGGGGGAATCCGGTGTTTGCTGGCATGGGAGCTATCTCTGGAGACGGCACCGCTTTCATCTTTCCAGCACCCGGTGAAGATGGCTCTTTCTCGATGACTATTCATTTGCAAAAGCCTCACTTGGAAGCTTTCAAGAGGTTCTTCTACGATGACGTTAATGGGAAGCTGTG 1406 0.4566 MVSIKASHTVIPSEPTPKVLSGLAEIDRLFHPAIAYTHLIYVYKPTHQHSTITDATEKIRDSLSKILVHYHPVAGRLRYIENGRFEVDCNAKGAILLEAESTKSAADYGDFTPNEKIRELVPMVQVDITKSIEDFPLLVVQVTRLNCGALCVGMKISHVLFDGEAIVSFINSWTKIASGEKLDEGEIPPMDRTVLKRQEPVQAPRFEHQEFNPLPTILGASDSLGVEESKKETDVAMVKLTNEQVVKLKNKANDQAAMDGKDQTLNHHRPYSRFESVAGYIWRCIAKGRQGDPLQPTGIVIIVDIRTRLKPPLPKNYFGNAVHHQVTPICHSGDIISKPLSYAASKIRESLETLTDEYLRSQHDYLTRQAGTWDWNRTIYRVFENMGQLFLGNPNMMFSSWMRMPLYDADFGWGNPVFAGMGAISGDGTAFIFPAPGEDGSFSMTIHLQKPHLEAFKRFFYDDVNGKL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01322 468 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 464 - -
Bva09g01322 468 Gene3D - 1 213 IPR023213 -
Bva09g01322 468 Gene3D - 222 462 IPR023213 -
Bva09g01322 468 Pfam Transferase family 1 461 - -
Bva09g01322 468 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01322 Bva-Chr9 7191949 7193890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01322 2 462 Monolignol Biosynthesis Gene Families AT5G48930 37.204 3.57e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01322 K13065 - gmx:100778626 439.499