Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01283 ATGGCATTGTCCGGCCGAATCAGATCGGGCATCTCTCTCTTCAACAAATTAGGGTATCTCACCTCTGATTCTCTCTCTGCTCAGAGATCCACGCTTCCCAGAACCCTGACTGCCCCTGCCAATTTCGTGACCTCAAGAAATTTTTCCATCTCATCAGGGAAGCAAAAGGAAGAGCGAGTTAAGGTGCCACTGGCTTTATTTGGTGGCTCAGGAAACTATGCCTCTGCTTTGTATATTGCAGCGGTAAAATCTAATGTTGTAGACAAGGTTGAGTCTGAGATTCTTGATCTTGTTGAGGCAGCAAAGAATAGTCCTACATTTTCACAGTTCGGCAAGGACTTGTCTGTGCCTTTAGAAACAAGAGTAAAAGCTGTTCAGGAAATTGCAAATCAAGCtaaattttcagaaattaCGAAGAACTTCCTTGTTCTCTTGGCGGAGAATGGGAGGCTAAGAAACGTAGACACCATAGCAAAGAGGTTTGTGGAGTTGACTATGGCATATAAGGGAGAAATGAAAGCCATTGTCACTACTGTCATTCCTCTTCCACCTGCGGAGGAGAAGGAGCTGAAGGAGACTCTTCAGGAGATCATTGGAGCTGGGAAAAAGGTTAAAATTGAACAGAAGATTGATCCCAGTATACTTGGTGGTCTTGTAGTAGAATTTGGCCAGAAGGTCTTTGACATGTCAATTAAGACTAGGGCACTCCAGATGGAGAGGTTCCTCCGAGATCCTATAAATATATCCAACATCTA 755 0.4344 MALSGRIRSGISLFNKLGYLTSDSLSAQRSTLPRTLTAPANFVTSRNFSISSGKQKEERVKVPLALFGGSGNYASALYIAAVKSNVVDKVESEILDLVEAAKNSPTFSQFGKDLSVPLETRVKAVQEIANQAKFSEITKNFLVLLAENGRLRNVDTIAKRFVELTMAYKGEMKAIVTTVIPLPPAEEKELKETLQEIIGAGKKVKIEQKIDPSILGGLVVEFGQKVFDMSIKTRALQMERFLRDPINISNI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01283 251 Gene3D - 69 162 IPR026015 -
Bva09g01283 251 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 72 240 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 Pfam ATP synthase delta (OSCP) subunit 71 240 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PRINTS ATP synthase delta subunit signature 202 217 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PRINTS ATP synthase delta subunit signature 150 164 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PRINTS ATP synthase delta subunit signature 217 235 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PRINTS ATP synthase delta subunit signature 69 88 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PRINTS ATP synthase delta subunit signature 139 150 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 204 223 IPR020781 GO:0015986|GO:0016020|GO:0046933
Bva09g01283 251 Hamap ATP synthase subunit delta [atpD]. 65 244 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PANTHER ATP SYNTHASE DELTA CHAIN 37 244 IPR000711 GO:0015986|GO:0046933
Bva09g01283 251 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 37 244 - -
Bva09g01283 251 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 70 170 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01283 Bva-Chr9 6944228 6948108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01283 109 251 Primary Pumps ATPases AT5G13450 66.434 1.37e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01283 K02137 - qsu:112038778 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01283 09 6944228 6948108 Bva09g01283 09 6944228 6948108 ECH