Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01278 ATGGGGCCCACCCAATTGAGCAAAGGAGCCTCCAAAGAAATCGCGCAGCCACCGATCTCTCTCTGCTTTGAAAGGAAAGTCAGAATGGTTGATCAGCATCCCACAATCGTTCAGAAGGTAGCCAACCAGCTCCATCTCCGTTCTGGTATTTCAGAAATTCAGAGTCATGATGGAAGCTTCCAGAGGCCTGCTGCATTCTACCAAAGACGGTCATATGGCAACTACTCAAATGCTGCATTCCAGTACCCAGCATGCAGAGCTACATGTGATCTGTCTGCTGTTACAACAACAGCTTCCCCAGTTTTTATTGCAGCTCCTGCTGAGAAAGGCAACTTCCTTATTGACTTTCTTATGGGTGGAGTCTCAGCGGCTGTATCCAAGACGGCAGCCGCTCCAATTGAACGTGTTAAACTTTTGATTCAGAACCAGGATGAAATGATTAAGGCTGGTAGACTCTCTGAGCCCTATAAGGGTATTGGTGATTGTTTTACAAGAACAATGAAAGATGAGGGTGTTATTTCCCTTTGGAGAGGTAACACTGCCAATGTCATCCGTTATTTCCCCACCCAGGCTTTGAACTTTGCTTTCAAGGACTACTTCAAGAgacttttcaatttcaagaaGGATAAGGATGGTTACTGGAAATGGTTCGCTGGCAACTTGGCTTCTGGAGGTGCTGCCGGTGCCTCATCTCTTCTGTTTGTGTACTCCCTGGATTATGCTCGTACCCGTTTGGCTAATGACGCCAAGGCTGCTAAGAAGGGGGGTGGTGGAAGACAATTCAATGGGCTTATTGATGTCTACAGGAAGACAATGGCAAGTGATGGAGTTGCTGGTCTTTACCGTGGTTTCAACATCTCTTGTGTTGGAATCATTGTCTACCGTGGTCTTTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTCCTGACTGGAAAATTACAGGATAGCTTCTTTGCAAGCTTTGCCCTTGGTTGGCTCATCACCAATGGTGCAGGTCTAGCATCATACCCCATTGACACTGTCCGTAGAAGAATGATGATGACCTCCGGCGAAGCCGTCAAGTACAAGAGCTCCTTGGATGCATTCAGTCAAATCCTCAAGAACGAGGGTGCCAAGTCCTTGTTCAAGGGAGCTGGTGCTAACATCCTCCGTGCCGTCGCCGGTGCTGGTGTGCTCGCCGGATATGACAAGCTACAGGTCATAGTGTTGGGGAAGAAGTACGGATCCGGTGGTGCTTA 1241 0.4738 MGPTQLSKGASKEIAQPPISLCFERKVRMVDQHPTIVQKVANQLHLRSGISEIQSHDGSFQRPAAFYQRRSYGNYSNAAFQYPACRATCDLSAVTTTASPVFIAAPAEKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFTRTMKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLIDVYRKTMASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVLGKKYGSGGA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01278 413 Gene3D Mitochondrial carrier domain 113 409 IPR023395 -
Bva09g01278 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 203 IPR018108 -
Bva09g01278 413 PRINTS Adenine nucleotide translocator signature 189 201 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva09g01278 413 PRINTS Adenine nucleotide translocator signature 321 337 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva09g01278 413 PRINTS Adenine nucleotide translocator signature 215 228 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva09g01278 413 PRINTS Adenine nucleotide translocator signature 112 124 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva09g01278 413 PRINTS Adenine nucleotide translocator signature 156 177 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva09g01278 413 Pfam Mitochondrial carrier protein 214 311 IPR018108 -
Bva09g01278 413 Pfam Mitochondrial carrier protein 317 401 IPR018108 -
Bva09g01278 413 Pfam Mitochondrial carrier protein 111 207 IPR018108 -
Bva09g01278 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 308 IPR018108 -
Bva09g01278 413 SUPERFAMILY Mitochondrial carrier 110 398 IPR023395 -
Bva09g01278 413 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 32 413 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva09g01278 413 PRINTS Mitochondrial carrier protein signature 115 128 IPR002067 GO:0055085
Bva09g01278 413 PRINTS Mitochondrial carrier protein signature 178 198 IPR002067 GO:0055085
Bva09g01278 413 PRINTS Mitochondrial carrier protein signature 325 347 IPR002067 GO:0055085
Bva09g01278 413 PRINTS Mitochondrial carrier protein signature 230 248 IPR002067 GO:0055085
Bva09g01278 413 PRINTS Mitochondrial carrier protein signature 128 142 IPR002067 GO:0055085
Bva09g01278 413 PRINTS Mitochondrial carrier protein signature 281 299 IPR002067 GO:0055085
Bva09g01278 413 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 32 413 - -
Bva09g01278 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 316 402 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01278 Bva-Chr9 6914273 6917894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01278 32 413 Antiporters AT5G13490 82.292 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01278 K05863 - gmx:100819556 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01289 07 13623671 13627966 Bva09g01278 09 6914273 6917894 ECH
Bva09g01278 09 6914273 6917894 Bva09g01278 09 6914273 6917894 ECH