Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01273 ATGTCCTCCAAAGTTTTCACCTTGAATGTTCTTGAACAATGCAGGGTCTCTCCCCCACCCAATTCAACCCAAACAAAAACTTTCCCTCTCACTTTCCTTGACATTCCTTGGCTCTTCTTCTCTCCAAACAaccctcttttcttctatgaATTCCCCCATTCAGTGTCTCATTTCATGGCTACCATTGTCCCAAAACTCAagctttctctctccctcaCCCTCCAACACTACTACCCTTTTGCTGCCAGCTTTGTTTCCCCGCCTGGAACCGGGAAGCCCCATCTCGTTTTCACCGATGGAAACTCTGTTTCACTCGAAATCGCCGAGTCAAATGGCGACTTTGACCACTGCTGCAGCTATTACCCTAGAGATGCGAGTGAGTTTCACTTGCTTGCACCAAAATTGACACCATGTGAGAAGAAAGATTCCCCTTTGTTGGCAATTCAAGTTACGATTTTCAGGAATGCTGGATTCTGCATTGGAATCGCTTACCACCATGTTGTTGCTGATGGAAGAACCTTCAACAATTTTGTCAAGACATGGGCTTCGTATTGTAGATATGAAACGACGTCGTTTAACCTGAAACTAATACCATTTTATGATCGAAGTGTGATAATTGACACCCATGAGCTTGAAGTGGTTTTCTTGGGGCAATGGAGGAAGAGAAAGCTTGCACAGGGAATTGCTATAGGCAGAGAAGTCCGGGTTGATTTGTCGGGCATGGTTCGGGCCACATTCACAATGGGTTCAGCTGAAATGGAGCACATCAAGCATTGGATCATTGCTAGgtgcaagaagaagaaccTGTCTCAACCATTGCGTTTATCTCCGTATATCTTAACCTGTGCTTTTCTTTGGGTTTGTTTGCTAAAAACTCACCGAATTGAGGATGAAAATGACCCGAGTTACTTCGGGTTTGTAGCGGGTGGTATGACCCGGTTACCATTCTCGGTCCCGACTACCTATTTGGGTAACTTTGTTGGTTTTGGGAGGGCATCAGGGTCAAGGAATGAGCTATTAGGAGAAGATGGGATTGTTGTTGCAGCTAAGGCCATTGCAAAGACAGTTAAGCAGCTGGATTTGTCCATTTTTTCCGGGTCTGAAAAATGGGTATTGGATTGGGATGTCTTATTCGGGTCGGAGCATCATGTAATGGTTACCGGGTCTCCAAAAGTGGATCTTTATGGGACAGATTTTGGGTGGGGGAGACCTAAGAAAATAGAGGACATCTCCATTGACAATACAAAAGCCATTTCTCTGACAGAAAGCAGAGATTTGGAGGGTGGAATTGAGATTGGCATAGCTCTACCAAAGGATAAAATGGACATCTTCACCATTTTATTCACTCAAGGTTTGAAAGCTCTTTCATG 1370 0.4277 MSSKVFTLNVLEQCRVSPPPNSTQTKTFPLTFLDIPWLFFSPNNPLFFYEFPHSVSHFMATIVPKLKLSLSLTLQHYYPFAASFVSPPGTGKPHLVFTDGNSVSLEIAESNGDFDHCCSYYPRDASEFHLLAPKLTPCEKKDSPLLAIQVTIFRNAGFCIGIAYHHVVADGRTFNNFVKTWASYCRYETTSFNLKLIPFYDRSVIIDTHELEVVFLGQWRKRKLAQGIAIGREVRVDLSGMVRATFTMGSAEMEHIKHWIIARCKKKNLSQPLRLSPYILTCAFLWVCLLKTHRIEDENDPSYFGFVAGGMTRLPFSVPTTYLGNFVGFGRASGSRNELLGEDGIVVAAKAIAKTVKQLDLSIFSGSEKWVLDWDVLFGSEHHVMVTGSPKVDLYGTDFGWGRPKKIEDISIDNTKAISLTESRDLEGGIEIGIALPKDKMDIFTILFTQGLKALS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01273 456 PANTHER MALONYL-COENZYME A:ANTHOCYANIN 3-O-GLUCOSIDE-6''-O-MALONYLTRANSFERASE-LIKE 1 454 - -
Bva09g01273 456 Pfam Transferase family 13 444 - -
Bva09g01273 456 Gene3D - 8 229 IPR023213 -
Bva09g01273 456 SUPERFAMILY CoA-dependent acyltransferases 26 187 - -
Bva09g01273 456 Gene3D - 239 455 IPR023213 -
Bva09g01273 456 PANTHER - 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01273 Bva-Chr9 6883409 6885002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01273 39 444 Monolignol Biosynthesis Gene Families AT5G48930 21.739 1.46e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01273 - - gmx:100817166 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01273 09 6883409 6885002 Bva09g01273 09 6883409 6885002 ECH