Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01271 ATGGCCCAAAAAACGGAGAAGGAAGAGACCGAGTTCAAGGTGCCCGAAACCATCACCCCTTGCGTTAACAACTGCGGCGTCACCGGCAACCCCGCCACCAACAACATGTGCCAGCAGTGTTTCAACGcatccaccaccaccaccacttcTTCCTCCTCCGTTTCGTCGTCTACCTTCTCCATCGCCGGAATTTCAAGTACTTCTAACTTTTCCGACGATAAAGCTTCTAGATCCATCACGTCACGTTCGCCGAAGAGGTCTTATCCTTCATCGGATGAGTCAACGCAGTATCCATCACCGGATCGGTCGAAACCGGAGGATTCCACGCCGTCGGAGGCTAAGCGCGTGGTGAATCGGTGCTCCGGTTGCCGGAGGAAGGTCGGATTGACCGGTTTCCGGTGCCGGTGTGGAGATCTATTCTGCGCCGAACACCGGTACTCCGATCGTCACGACTGCAGCTACGACTACAAAGCCGTCGGGCGTGAGGCGATCGCGAGGGAAAATCCGGTGATCAAAGCAGCAAAGATCGTTAAGGTTTG 539 0.5288 MAQKTEKEETEFKVPETITPCVNNCGVTGNPATNNMCQQCFNASTTTTTSSSSVSSSTFSIAGISSTSNFSDDKASRSITSRSPKRSYPSSDESTQYPSPDRSKPEDSTPSEAKRVVNRCSGCRRKVGLTGFRCRCGDLFCAEHRYSDRHDCSYDYKAVGREAIARENPVIKAAKIVKV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01271 179 Gene3D - 1 63 - -
Bva09g01271 179 Pfam AN1-like Zinc finger 120 157 IPR000058 GO:0008270
Bva09g01271 179 MobiDBLite consensus disorder prediction 68 111 - -
Bva09g01271 179 SMART AN1_Zf_4 120 157 IPR000058 GO:0008270
Bva09g01271 179 MobiDBLite consensus disorder prediction 68 104 - -
Bva09g01271 179 Pfam A20-like zinc finger 20 42 IPR002653 GO:0003677|GO:0008270
Bva09g01271 179 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 179 - -
Bva09g01271 179 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Bva09g01271 179 Gene3D - 90 175 IPR035896 -
Bva09g01271 179 ProSiteProfiles Zinc finger AN1-type profile. 114 160 IPR000058 GO:0008270
Bva09g01271 179 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 58 - -
Bva09g01271 179 SUPERFAMILY AN1-like Zinc finger 102 173 IPR035896 -
Bva09g01271 179 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Bva09g01271 179 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01271 Bva-Chr9 6873151 6874248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01271 8 179 C2H2 Transcription Factor Family AT3G52800 37.288 3.06e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01271 - - adu:107463072 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01271 09 6873151 6874248 Bva09g01271 09 6873151 6874248 ECH