Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01265 ATGGACAAAGGAGTGCCTCCTAGCCTTTTTGTTAATGATGGTTCATTCATGGAGAGATTCAAGCAACTGCAACAGGAGCAGGAGAAGAAGACTTCCAAAGTAGAGGAGTCTAAATCAGCAAAGATTGTTTCAGGGTCTTTGACTCCTAATCCTTCCATTGGTAAAGCCTCTGTGGACTTTAAGGCTAGTAATGCAGGGAAAAATCTCCAGGCTGGTTCTAGTGGCAAACTTGCTTTTAGCATAAAACAGAAGTCAAAGCTAGTGCCACCACCTGTTAAGTTAAGTGGCGacgaggaagaagaagaaacagatGCTGGTGATGTTTCAAGTGATGCACCATCAAAGCGGAAAAAGTTGAGTCATAATGATGTCACTGAGCAATCATTGGGACAGCGAGATGTTGCACCTTCTTCCCCAAGTGATCCTACAGTGAAGACAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAatttttatttgatgagaAATGTGCTGACTACAAATACTATGAGTATCGGCTTGCCCAGGAGGAAAAGGCACTTGCACAGTCCAGAGAACCACAAACATCCCGTGGTGGTGGTACAAGCACCTCATCTTCCAGATCAACATATACTCCTCAGAGATCATCTCAGCAGCATTCATCTTACCAAATTCCTGCATCTGCTTTATACGAAAGTGCTGATGTTCCAAGAGCTTCTGGATCTGCAGGAACTACTGACGAGCCTGGTGCATCATCAAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAAAGCTGCACATGAAGAGAGGAGGAGACAACCTAAGCAGTCAAAAGATGAGATGCCCCCTCCTCCTTCTCTTCAAGCTTCTGGGAAAAAAGGTCATCACATGGGTGATTACATTCCCCAAGAAGAACTTGAGAAATTCATGGCTAGCTGTAATGATGTAGCAGCGCAGAAAGCTGCCAAGGAGGCTGCAGATAAGGCTAAAATTCAGGCTGATAACGTTGGCCACAAACTCTTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTTGGTAGCTCCAAGAAGGGTATTTCAGATCCAATCACGGCAGGGAACGTCAAGATGAACAACTTGGGGGTTGGTGCTCAAAATCCTGGGGAGGTGACTGAAGAAGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGTTATCGTTACAGGCCCAATCCtctgAATAACCCTCGCAAGGCTTATTACTG 1298 0.4314 MDKGVPPSLFVNDGSFMERFKQLQQEQEKKTSKVEESKSAKIVSGSLTPNPSIGKASVDFKASNAGKNLQAGSSGKLAFSIKQKSKLVPPPVKLSGDEEEEETDAGDVSSDAPSKRKKLSHNDVTEQSLGQRDVAPSSPSDPTVKTVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYEYRLAQEEKALAQSREPQTSRGGGTSTSSSRSTYTPQRSSQQHSSYQIPASALYESADVPRASGSAGTTDEPGASSNADSLALMEFYMKKAAHEERRRQPKQSKDEMPPPPSLQASGKKGHHMGDYIPQEELEKFMASCNDVAAQKAAKEAADKAKIQADNVGHKLLSKMGWKEGEGLGSSKKGISDPITAGNVKMNNLGVGAQNPGEVTEEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01265 432 MobiDBLite consensus disorder prediction 202 241 - -
Bva09g01265 432 MobiDBLite consensus disorder prediction 22 37 - -
Bva09g01265 432 MobiDBLite consensus disorder prediction 38 53 - -
Bva09g01265 432 MobiDBLite consensus disorder prediction 200 314 - -
Bva09g01265 432 Pfam Surp module 146 196 IPR000061 GO:0003723|GO:0006396
Bva09g01265 432 Coils Coil 20 40 - -
Bva09g01265 432 SUPERFAMILY Surp module (SWAP domain) 134 198 IPR035967 GO:0003723|GO:0006396
Bva09g01265 432 SMART G-patch_5 347 394 IPR000467 GO:0003676
Bva09g01265 432 MobiDBLite consensus disorder prediction 278 294 - -
Bva09g01265 432 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 432 - -
Bva09g01265 432 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 432 IPR040169 -
Bva09g01265 432 Pfam G-patch domain 350 393 IPR000467 GO:0003676
Bva09g01265 432 ProSiteProfiles SURP motif repeat profile. 147 190 IPR000061 GO:0003723|GO:0006396
Bva09g01265 432 MobiDBLite consensus disorder prediction 108 123 - -
Bva09g01265 432 MobiDBLite consensus disorder prediction 86 146 - -
Bva09g01265 432 ProSiteProfiles G-patch domain profile. 349 396 IPR000467 GO:0003676
Bva09g01265 432 MobiDBLite consensus disorder prediction 22 55 - -
Bva09g01265 432 SMART surpneu2 145 199 IPR000061 GO:0003723|GO:0006396
Bva09g01265 432 MobiDBLite consensus disorder prediction 124 144 - -
Bva09g01265 432 MobiDBLite consensus disorder prediction 158 177 - -
Bva09g01265 432 Gene3D Surp module 96 203 IPR035967 GO:0003723|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01265 Bva-Chr9 6845472 6850454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01265 338 406 C2H2 Transcription Factor Family AT5G26610 43.478 8.83e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01265 K13096 - gmx:100786213 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01265 09 6845472 6850454 Bva09g01265 09 6845472 6850454 ECH