Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01259 ATGGATAAGGAGGTGACCACAACAGCAGCTCCATTCTCAATGCAGTCAATGCAGCCAATGCAACCAGTGCAGTCAGTTACTCCTCAAGTCCATCATAGCCACCAAGAGGATTATAATGTGAAGGACACCAACCCACAGCTCGGCGAGCAGTGGCCTAGAGATGGAGCTTTTGGTGGAAGGGAATGGATGATTGGTGATGAAAGGTTTACAAGCACATATGACCTTGTGGAGCAAATGTTCTATCTATATGTTCGGGTTTTGAAAGCGAGGAATCTTCCTTCCAGTGCCATCACTGCAAGCTGTGATCCTTATGTAGAGGTGAAGCTGGGAAACTATAAAGGAAGAACAAAGCATTTTGACAAGAAATTGAATCCAGAGTGGAACCAAGTCTTTGCTTTCTCAAAAGAACGCATTCACTCCTCTATTCTTGAAGTTTTTGTGAAGGATAAGGAAATGATGGGGAGAGATGATTACCTTGGAAGGGTGGTTTTTGATCTGAATGAGGTTACAACCAGAGTTCCACCAGATAGTCCTCTGGCTCCTCTATGGTACAGGCTTGAGGATCGGCGAGGAGAAGGAAAAGTAAGAGGGGATATTATGCTTGCAGTGTGGATGGGAATTCAAGCTGATGAAGCCTTCTCAGAAGCTTGGCATTCTGATGCTTCCACTGTTTATGGAGAGGGAGTTTTCAATATCAGATCAAAGGTTTATGTGTCACCAAAATTGTGGTACCTCAGGGTCAATGTCATTGAAGCTCAAGATGTCATTCCCAGTGACAGAAATCGCTTGCCTGAGGTTTTTGTAAAAGCTCAGGTGGGATGTCAAGTGCTGAGGACAAAGATATGTCCAACTCGGACAACTACTCCAATTTGGAAAGAAGATTTAGTTTTTGTGGTAGCCGAACCATTTGAGGAGCAATTGTCACTCACAGTGGAGGACCGCGTGCACCCTTCAAAGGATGAGGTACTAGGGAAAATAAACTTACCTTTGTCCATCTTTGAGAAGAGGCTAGACCACAGGCCAGTTCATTCTCGCTGGTTCAATCTTGagaaatttggttttggtgTACTAGAGGCTGATAGAAGGAAGGAGCTGAAGTTTTCAAGCAGAGTTCACCTAAGAGTTTGTCTTGAAGGAGGATACCATGTGATGGATGAATCAACTATGTACATTAGTGATCAAAGACCAACAGCAAGACAACTCTGGAAGCAGCCTATTGGGATTCTTGAAGTGGGAATCTTAGGAGCACAAGGGCTTCTCCCAATGAAGATGAAGGATGGCCGTGGCAGTACCGATGCATATTGTGTTGCGAAGTATGGCCAGAAATGGGTTAGAACCAGAACAATTCTTGATACTTTCAGTCCCAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACAGTGATCACATTGGGGGTTTTTGACAATTGCCATTTAGGTGGAGGTGGCAAAGCTAATGGTGGCAGTGCACCAGTCCGTGATTCGCGAATTGGGAAGGTAAGGATTCGGCTATCAACACTAGAAGCTCATAGGATTTATGCACATTCTTGCCCACTTCTTGTCTTAGACCCTCATGGAGTCAAGAAGATGGGTGAGCTTCAGCTAGCAGTGAGGTTCGCAACTCTTTCAATGGTTAATATGTTTAGCATTTATGGCCATCCCTTGCTACCCAAAATGCATTATCTGCATCCTTTCACGACGAACCAAGTAGACACTTTAAGGTACCAAGCCATCAACATTGTAGCTCTGAGGCTAGGCCGAGCTGAACCTCCTCTGAGGAAAGAAGTGGTGGAGTATATGCTTGATGTTGATTCCCATATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTACGCATCATGTCACTTGTCTCCGGTTTTCTCATATTGGGGCAATGGTTCAGTGATGTTTGCAATTGGAAGAATCCTGTCACATCTGTTCTagttcatattctttttctgatACTGATTTGGTACCCAGAGTTGATCCTCCCAACTCTATTTCTCTACATGTTCTTGATTAGTCTTTGGAACTACGGGTTCCGCCCAAGATACCCACCTCATATGGACCCTCAACTCTCATGGGCAGAAGTTGTTAACCCAGATGAACTTGATGAAGAATTTGATACATTCCCAACTTCTAAACGACATGACACTGTGAGAATGAGGTATGACAGGCTTCGAAGTGTTGCAGGAAGGATTCAAACTGTGGTTGGGGACGTAGCGACGCAAGGGGAGAGATTTCAGTCACTGTTGAGCTGGAGAGATCCAAGAGCAACCAGCATCTTTGTGGTATTCAGTTTTTGTGCAGCTGTTATGCTCTATACAACACCATTTAGAGTGGTGGCTCTGGTTGCAGGTTTGTATTACTTAAGGCATCCAACGTTTCGAAGCAAGCTTCCTTCTGTGCCCATCAACTTCTTCAAGAGACTACCAGCTAGAACAGATGGTTTACTGTA 2468 0.4388 MDKEVTTTAAPFSMQSMQPMQPVQSVTPQVHHSHQEDYNVKDTNPQLGEQWPRDGAFGGREWMIGDERFTSTYDLVEQMFYLYVRVLKARNLPSSAITASCDPYVEVKLGNYKGRTKHFDKKLNPEWNQVFAFSKERIHSSILEVFVKDKEMMGRDDYLGRVVFDLNEVTTRVPPDSPLAPLWYRLEDRRGEGKVRGDIMLAVWMGIQADEAFSEAWHSDASTVYGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQVGCQVLRTKICPTRTTTPIWKEDLVFVVAEPFEEQLSLTVEDRVHPSKDEVLGKINLPLSIFEKRLDHRPVHSRWFNLEKFGFGVLEADRRKELKFSSRVHLRVCLEGGYHVMDESTMYISDQRPTARQLWKQPIGILEVGILGAQGLLPMKMKDGRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGGKANGGSAPVRDSRIGKVRIRLSTLEAHRIYAHSCPLLVLDPHGVKKMGELQLAVRFATLSMVNMFSIYGHPLLPKMHYLHPFTTNQVDTLRYQAINIVALRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFLRIMSLVSGFLILGQWFSDVCNWKNPVTSVLVHILFLILIWYPELILPTLFLYMFLISLWNYGFRPRYPPHMDPQLSWAEVVNPDELDEEFDTFPTSKRHDTVRMRYDRLRSVAGRIQTVVGDVATQGERFQSLLSWRDPRATSIFVVFSFCAAVMLYTTPFRVVALVAGLYYLRHPTFRSKLPSVPINFFKRLPARTDGLL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01259 822 Gene3D C2 domain 382 542 IPR035892 -
Bva09g01259 822 Pfam C2 domain 243 349 IPR000008 -
Bva09g01259 822 Pfam C2 domain 81 172 IPR000008 -
Bva09g01259 822 Pfam C2 domain 407 522 IPR000008 -
Bva09g01259 822 CDD C2C_MCTP_PRT_plant 244 396 - -
Bva09g01259 822 Pfam Plant phosphoribosyltransferase C-terminal 667 822 IPR013583 -
Bva09g01259 822 ProSiteProfiles C2 domain profile. 224 347 IPR000008 -
Bva09g01259 822 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 27 822 - -
Bva09g01259 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 407 544 IPR035892 -
Bva09g01259 822 CDD C2D_MCTP_PRT_plant 408 539 - -
Bva09g01259 822 MobiDBLite consensus disorder prediction 1 50 - -
Bva09g01259 822 ProSiteProfiles C2 domain profile. 385 520 IPR000008 -
Bva09g01259 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 243 398 IPR035892 -
Bva09g01259 822 Gene3D C2 domain 77 223 IPR035892 -
Bva09g01259 822 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 81 220 IPR035892 -
Bva09g01259 822 SMART C2_3c 408 519 IPR000008 -
Bva09g01259 822 SMART C2_3c 81 178 IPR000008 -
Bva09g01259 822 SMART C2_3c 244 342 IPR000008 -
Bva09g01259 822 Gene3D C2 domain 231 376 IPR035892 -
Bva09g01259 822 ProSiteProfiles C2 domain profile. 63 184 IPR000008 -
Bva09g01259 822 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 27 822 - -
Bva09g01259 822 CDD C2B_MCTP_PRT_plant 81 206 - -
Bva09g01259 822 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01259 Bva-Chr9 6801293 6804528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01259 36 822 Lipid Metabolism Gene Families AT5G48060 76.582 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01259 - - tcc:18614670 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01313 07 13739930 13743286 Bva09g01259 09 6801293 6804528 ECH
Bva04g02228 04 21275109 21278990 Bva09g01259 09 6801293 6804528 ECH
Bva13g02342 13 17839304 17842954 Bva09g01259 09 6801293 6804528 ECH
Bva09g01259 09 6801293 6804528 Bva09g01259 09 6801293 6804528 ECH