Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01251 ATGATGGGTCTGTTCCTTACTTCATATGTGTCTCttattgttcttcttcttctgcttcccATTCCCATTATGAAATCAGTGGCTACTGTCATTGAAGTTGAAGGAGAAGGAgttgctctctctctcaaacGGAGCAGTTTTCCTGCAGATTTTGTATTTGGCACAGCATCTTCTGCATATCAGTATGAAGGAGCAACGAATGAAGGGGGAAAAGGTCCAAACATATGGGATACCTTCATTCAGAAATACCCAAATAAAATAGTAGATCAGAGCAACGGGTCGATTGGTGCAGATTCTTATCATCGTTACAAGGAAGATGTGCAAATAATGAAGGAGCTAGGGTTTAACGCATACAGAATCTCCATCTCATGGTCAAGGCTATTACCAGGTGGCAACTTAGCAAGTGGAGTTAATAAAGAAGGGATCCGATATTACAATAATCTCATCAACGAGCTTCTGTCAAATGGAGTGGAACCCTTTGTAACTCTTGCCCATTACGATTATCCACCACAGAGCCTAGAAGATGCATATGGTGGCTTTTTGAGCCCACAAATTGTgaAAGACTTTGCAGACTATGCAGATGTATGCTTCAGGGAATTTGGTGACAGAGTGAAATATTGGATCACAATAAATGGTCCATCTGTTTACTCTCAGTTGGCATATGCGCAGGGGGAATATGCTCCAGGCAGATGCTCAAACTGGTTGCCATTCAACTGCACAGGTGGTGATTCGGCTACTGAACCCTATATTGTTACTCATCACCAGATTCTTGCTCATGCTGCTGCTGTCAAACTATATAGACAGAAATATCAGGAGTCCCAAATGGGTCAGATAGGGATTATTCACGGCATCAACTGGATAATACCTTTGTCCCAGTCTGCAGAAGACGTTGATGCAGCATCTCGGGTACTTGCATTCACATTGGGCTGGTTTATGGAACCACTGGTTTCTGGTTCATACCCAGATGTAATGGTTAAGTATGTTGGAGAGAGGCTGCCAAGATTTTCTCAAGAGGAATCAAATATGGTTAagaattcttttgatttttttgggttcaaCTATTACAGTACAGCTTATGCAGCTCATGTTGAATGCCAAAGTGAAAACAAAACCTACCTCACAGATCAATGTGCTGAAGTTAAATATGAGCGAAATGGGATTCCAATTGGTCCAAAGGCCGCTTCTGATTGGATATACGTCTATCCCCAAGGAATTGAGGAACTACTGCTATACATGAAGAACAAGTATAACAATCCAGTCATTTATATAACTGAAAACGGATTTGATGATTTTGACAATGGTAAGAAATCAATGTTGGATAAGGAAAGAATAGACTACCATATTCAGCATCTTTCACATCTTCAGAGAGCTTTGTTGAATGGCGTAAACGTTAAAGGCTATTTTGCATGGTCGCTCTTGGATAATTTTGAGTGGAACTTAGGTTACACAGTTCGATTTGGAATCATTTATGTAGATTATGACgatggttttaaaaaatatgcaaaagGTTCAGCAAAATGGTTTAAGAGATTTCTTCatcaagaaattgaatttcaatG 1559 0.3752 MMGLFLTSYVSLIVLLLLLPIPIMKSVATVIEVEGEGVALSLKRSSFPADFVFGTASSAYQYEGATNEGGKGPNIWDTFIQKYPNKIVDQSNGSIGADSYHRYKEDVQIMKELGFNAYRISISWSRLLPGGNLASGVNKEGIRYYNNLINELLSNGVEPFVTLAHYDYPPQSLEDAYGGFLSPQIVKDFADYADVCFREFGDRVKYWITINGPSVYSQLAYAQGEYAPGRCSNWLPFNCTGGDSATEPYIVTHHQILAHAAAVKLYRQKYQESQMGQIGIIHGINWIIPLSQSAEDVDAASRVLAFTLGWFMEPLVSGSYPDVMVKYVGERLPRFSQEESNMVKNSFDFFGFNYYSTAYAAHVECQSENKTYLTDQCAEVKYERNGIPIGPKAASDWIYVYPQGIEELLLYMKNKYNNPVIYITENGFDDFDNGKKSMLDKERIDYHIQHLSHLQRALLNGVNVKGYFAWSLLDNFEWNLGYTVRFGIIYVDYDDGFKKYAKGSAKWFKRFLHQEIEFQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01251 519 PANTHER GLYCOSYL HYDROLASE 32 512 IPR001360 GO:0004553|GO:0005975
Bva09g01251 519 SUPERFAMILY (Trans)glycosidases 42 512 IPR017853 -
Bva09g01251 519 Gene3D Glycosidases 29 518 - -
Bva09g01251 519 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 51 65 IPR033132 -
Bva09g01251 519 PANTHER BETA-GLUCOSIDASE 16 32 512 - -
Bva09g01251 519 Pfam Glycosyl hydrolase family 1 45 514 IPR001360 GO:0004553|GO:0005975
Bva09g01251 519 PRINTS Glycosyl hydrolase family 1 signature 346 360 IPR001360 GO:0004553|GO:0005975
Bva09g01251 519 PRINTS Glycosyl hydrolase family 1 signature 485 497 IPR001360 GO:0004553|GO:0005975
Bva09g01251 519 PRINTS Glycosyl hydrolase family 1 signature 461 478 IPR001360 GO:0004553|GO:0005975
Bva09g01251 519 PRINTS Glycosyl hydrolase family 1 signature 440 451 IPR001360 GO:0004553|GO:0005975
Bva09g01251 519 PRINTS Glycosyl hydrolase family 1 signature 421 429 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01251 Bva-Chr9 6746279 6750150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01251 7 515 Glycoside Hydrolase AT5G44640 56.667 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01251 - K01188 aip:107635256 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01251 09 6746279 6750150 Bva07g01373 07 14154491 14161240 BWGD
Bva09g01251 09 6746279 6750150 Bva09g01251 09 6746279 6750150 ECH