Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g01250 ATGGAGGAGAGCTCACGTGGCCGGCAAGCCGGCCGAATAGCCGGAAAAGATGTGTTATCAAGACCATTATCTGAATGCAGATCGTGTAGagCCCTTAGAGGAGTTAAAGTTGAAAAAGTTGAAGTAACACAAAGAGGACATGTACGAAGAAAATATCGTGTTTCAGGATTGACTTCTCAACCCACAAGAGAACTTGTGTTTCCTGTTGATGATAACTCTACTATGAAGTCAGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACCATTCAGCACACTCACCTTCCTTGTCTACAAGCCTGCAAAATTGTTGAGGGCCAACATTGTACAACAAGGTTTATATTTGACGCCACGCGTGTAGTTACTGGTGCTTATGGGAAACCCATCTTTGTTGATAAACTAGGAGCTAGTCTGgattcaatttcaaatggaGCGCCTTTGGAAGATTTTGGACATGGTCATCCAGATGCTAATCTTACGGTCTCGCCCGATCAATGCCAACAAGTGGTGCTTTGGATCGTCCCTACTGGGTGGAAATTTTTTGGGAATCTTGTGGATGCCGGGAAGTTGTCCATTTATGGGGAAGAGAGCTTTGGAACAGGTTCTGATCACATACGCGAAAAGGATGGCATCTGGGCTGTATTAGCTTGGCTTTCTATTCTTGCACAAGCCAACAAAGGCAAGAAACCAGGGGAGAAACTGGAATGTGAATCTGAAGGTGCTAATAAGATGGTAGAATACCTACGAGCATTTATCTCTAAGAGCAAGCATGGTGATAAATTTGGAAGTTATTCCCTCCAGTTTGTTGATGATTTCGCATTCACTGATCCAATGGAAGTGTGGTATCAAAACAAGGTGTCCGGTTTGTTTTTACAGATGCATCAAGAATTATATTCTGATTATGGGGAACTGGCTCTACAGACTCAAGCTGAAGGAGGCAAGCTtagatttcattttcagtCTTTTGTGTCATTCGGTGCTGCCTCCAGGGTTAAAATTATGCTCTGTTGCGACTCCAGCGAGCAGCGTCTTCTTGGAGTATCACCGAAGAAGTTGAAAATGCAAACAGAGTGGAACAATATCTCGAAGATTTCATTTGCTTTGCACAAGACAGCTAGGCATGGAGCAAAGACTCAAGATGAAGAAGGCAGGCTtagatttcattttcagtCTTTTGTGTCTTTCGATGCTGCCTCCAGGACAATAATGGCCTTGTGGAGAACAAGACTGTTAACCCCTAAGCAGAGAAAGCACAAATTGCAGAACTTCCAATCAAGATATCGAAAATA 1289 0.4182 MEESSRGRQAGRIAGKDVLSRPLSECRSCRALRGVKVEKVEVTQRGHVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHTHLPCLQACKIVEGQHCTTRFIFDATRVVTGAYGKPIFVDKLGASLDSISNGAPLEDFGHGHPDANLTVSPDQCQQVVLWIVPTGWKFFGNLVDAGKLSIYGEESFGTGSDHIREKDGIWAVLAWLSILAQANKGKKPGEKLECESEGANKMVEYLRAFISKSKHGDKFGSYSLQFVDDFAFTDPMEVWYQNKVSGLFLQMHQELYSDYGELALQTQAEGGKLRFHFQSFVSFGAASRVKIMLCCDSSEQRLLGVSPKKLKMQTEWNNISKISFALHKTARHGAKTQDEEGRLRFHFQSFVSFDAASRTIMALWRTRLLTPKQRKHKLQNFQSRYRK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g01250 429 SUPERFAMILY Phosphoglucomutase, first 3 domains 171 227 IPR016055 GO:0005975|GO:0016868
Bva09g01250 429 SUPERFAMILY PAZ domain 17 118 IPR036085 GO:0005515
Bva09g01250 429 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 170 234 IPR045244 GO:0004614|GO:0005975
Bva09g01250 429 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 111 163 IPR045244 GO:0004614|GO:0005975
Bva09g01250 429 Gene3D paz domain 11 108 - -
Bva09g01250 429 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 235 280 - -
Bva09g01250 429 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 170 234 - -
Bva09g01250 429 ProSiteProfiles PAZ domain profile. 40 100 IPR003100 GO:0005515
Bva09g01250 429 Gene3D - 236 302 - -
Bva09g01250 429 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 111 163 - -
Bva09g01250 429 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 235 280 IPR045244 GO:0004614|GO:0005975
Bva09g01250 429 CDD PAZ_argonaute_like 30 100 - -
Bva09g01250 429 Pfam PAZ domain 36 102 IPR003100 GO:0005515
Bva09g01250 429 Gene3D - 165 235 - -
Bva09g01250 429 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 170 231 IPR005846 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g01250 Bva-Chr9 6738555 6744636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g01250 10 113 Eukaryotic Initiation Factors Gene Family AT5G43810 61.538 6.19e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g01250 K01835 - pvy:116121825 179.104